RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SSTR5P35346 364 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 FABP6P51161 128 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 BCAP31P51572 246 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 UCNP55089 124 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 SYNJ2BPP57105 145 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 RAP1AP62834 184 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 KIR2DS1Q14954 304 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 ORMDL2Q53FV1 153 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 AVPI1Q5T686 147 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 WDR82Q6UXN9 313 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 MRPL21Q7Z2W9 205 aaKnown RBP3.09□□□□□ -1.91
CPNE3-213ENST00000622183 SNX31Q8N9S9 440 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 ITFG1Q8TB96 612 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 DCPSQ96C86 337 aaKnown RBP3.09□□□□□ -1.91
CPNE3-213ENST00000622183 RNF145Q96MT1 663 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 ZNF317Q96PQ6 595 aaPredicted RBP3.09□□□□□ -1.91
CPNE3-213ENST00000622183 CD209Q9NNX6 404 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 PRSS16Q9NQE7 514 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 SCN2AQ99250 2005 aa3.09□□□□□ -1.92
CPNE3-213ENST00000622183 DCAF1Q9Y4B6 1507 aa3.09□□□□□ -1.92
CPNE3-213ENST00000622183 IGLV3-16A0A075B6K0 115 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 PDZK1P1A8MUH7 402 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 H7C1H1 209 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 ZNF701M0R085 212 aaPredicted RBP3.08□□□□□ -1.92
CPNE3-213ENST00000622183 ENTPD5O75356 428 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 HSBP1O75506 76 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 TDP2O95551 362 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 SNAI1O95863 264 aaPredicted RBP3.08□□□□□ -1.92
CPNE3-213ENST00000622183 OTCP00480 354 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 PGA4P0DJD7 388 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 PGA3P0DJD8 388 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 PGA5P0DJD9 388 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 MAGP20916 626 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 CPN2P22792 545 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 PPOXP50336 477 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 SERPINB8P50452 374 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 RAB7AP51149 207 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 ULK3Q6PHR2 472 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 SAXO1Q8IYX7 474 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 COX18Q8N8Q8 333 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 OR11H7Q8NGC8 314 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 PIFOQ8TCI5 191 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 RAB1CQ92928 201 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 KIAA1143Q96AT1 154 aaPredicted RBP3.08□□□□□ -1.92
CPNE3-213ENST00000622183 BTN2A3PQ96KV6 586 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 ZNF285Q96NJ3 590 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 SDHCQ99643 169 aaPredicted RBP3.08□□□□□ -1.92
CPNE3-213ENST00000622183 GPR21Q99679 349 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 OR2AG1Q9H205 316 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 HMG20AQ9NP66 347 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 MED4Q9NPJ6 270 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 MCUBQ9NWR8 336 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 KLK12Q9UKR0 248 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 DDX19BQ9UMR2 479 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 ADGRA3Q8IWK6 1321 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 CAMTA1Q9Y6Y1 1673 aa3.08□□□□□ -1.92
CPNE3-213ENST00000622183 TRAV6A0A075B6T7 132 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 SLC22A20A6NK97 555 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 SYCE1LA8MT33 242 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 ANKRD63C9JTQ0 380 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 ANKRD65E5RJM6 399 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 CRYGCP07315 174 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 DCNP07585 359 aaKnown RBP3.07□□□□□ -1.92
CPNE3-213ENST00000622183 PGAM1P18669 254 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 RAB5AP20339 215 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 PFN2P35080 140 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 RPS9P46781 194 aaKnown RBP3.07□□□□□ -1.92
CPNE3-213ENST00000622183 PSMD4P55036 377 aaKnown RBP3.07□□□□□ -1.92
CPNE3-213ENST00000622183 RPS23P62266 143 aaKnown RBP3.07□□□□□ -1.92
CPNE3-213ENST00000622183 ESRRGP62508 458 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 SLC39A6Q13433 755 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 ZNF266Q14584 549 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 GCSAMLQ5JQS6 135 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 RWDD4Q6NW29 188 aaKnown RBP3.07□□□□□ -1.92
CPNE3-213ENST00000622183 ZFP2Q6ZN57 461 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 PGAM4Q8N0Y7 254 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 ARRDC1Q8N5I2 433 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 TRAM1L1Q8N609 369 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 CYB561D1Q8N8Q1 229 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 OR5T3Q8NGG3 340 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 OR5AR1Q8NGP9 310 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 OR5W2Q8NH69 310 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 C15orf40Q8WUR7 153 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 PIH1D2Q8WWB5 315 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 RGP1Q92546 391 aaPredicted RBP3.07□□□□□ -1.92
CPNE3-213ENST00000622183 ANP32BQ92688 251 aaKnown RBP3.07□□□□□ -1.92
CPNE3-213ENST00000622183 TOP1MTQ969P6 601 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 SGTBQ96EQ0 304 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 PDXPQ96GD0 296 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 TIMM17AQ99595 171 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 FBXO44Q9H4M3 255 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 C12orf10Q9HB07 376 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 DYRK4Q9NR20 520 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 SYNRGQ9UMZ2 1314 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 FHOD3Q2V2M9 1422 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 UNC13AQ9UPW8 1703 aa3.07□□□□□ -1.92
CPNE3-213ENST00000622183 MTCL1Q9Y4B5 1905 aaKnown RBP3.07□□□□□ -1.92
CPNE3-213ENST00000622183 ARPC4-TTLL3A0A0A6YYG9 625 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms