RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ZAR1Q86SH2 424 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 CMTM1Q8IZ96 169 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 OR10G3Q8NGC4 313 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 OR1S1Q8NH92 325 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 OR1L3Q8NH93 324 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 PRR7Q8TB68 274 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 C15orf40Q8WUR7 153 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 KCTD12Q96CX2 325 aaKnown RBP7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 NICN1Q9BSH3 213 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 NOX4Q9NPH5 578 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 RCE1Q9Y256 329 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 NUP210Q8TEM1 1887 aaPredicted RBP7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 M0R1B8 84 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 SPDEFO95238 335 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 CRYZL1O95825 349 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 ATF1P18846 271 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 CXCL3P19876 107 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 ATP1B3P54709 279 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 P2RX3P56373 397 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 LGALS4P56470 323 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 BDH1Q02338 343 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 ESCO2Q56NI9 601 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 LAMTOR1Q6IAA8 161 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 EIF5AL1Q6IS14 154 aaKnown RBP7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 FAM109AQ8N4B1 249 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 AKR7LQ8NHP1 331 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 MAFIPQ8WZ33 124 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 FBXW5Q969U6 566 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 ERVMER34-1Q9H9K5 563 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 ADGRL4Q9HBW9 690 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 MEPEQ9NQ76 525 aaPredicted RBP7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 SLC22A11Q9NSA0 550 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 KCNE5Q9UJ90 142 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 RPH3ALQ9UNE2 315 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 MMACHCQ9Y4U1 282 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 IGHV1OR21-1A0A087WYE8 117 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 MASP2O00187 686 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 GAAP10253 952 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 NME1P15531 152 aaKnown RBP7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 NKX6-1P78426 367 aaPredicted RBP7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 ZNF85Q03923 595 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 EXT1Q16394 746 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 LIPNQ5VXI9 398 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 TMEM81Q6P7N7 255 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 CCDC28AQ8IWP9 274 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 RNF113BQ8IZP6 322 aaKnown RBP7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 GIMAP1Q8WWP7 306 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 KISS1RQ969F8 398 aaPredicted RBP7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 NUDT9Q9BW91 350 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 GPR173Q9NS66 373 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 OCIAD1Q9NX40 245 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 TAS2R3Q9NYW6 316 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 ZMIZ1Q9ULJ6 1067 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 C19orf53Q9UNZ5 99 aaPredicted RBP7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 USP34Q70CQ2 3546 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 FASNP49327 2511 aaKnown RBP7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 ARFGEF3Q5TH69 2177 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 TP53BP1Q12888 1972 aaPredicted RBP7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 ZNF814B7Z6K7 855 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 K7EQS6 105 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 SHOXO15266 292 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 PLPP2O43688 288 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 IGHV3-13P01766 116 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 IGHV3-7P01780 117 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 THBS1P07996 1170 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 CD34P28906 385 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 OPRM1P35372 400 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 MAGEB1P43366 347 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 CX3CR1P49238 355 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 RAB4BP61018 213 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 PCBD1P61457 104 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 PLA1AQ53H76 456 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 ZNF684Q5T5D7 378 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 SPINK14Q6IE38 97 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 RFPL4BQ6ZWI9 263 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 TPRA1Q86W33 373 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 CA13Q8N1Q1 262 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 OR11H7Q8NGC8 314 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 THRSPQ92748 146 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 VN1R1Q9GZP7 353 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 AUNIPQ9H7T9 357 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 HRASLSQ9HDD0 168 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 SLC22A7Q9Y694 548 aa7.47□□□□□ -1.21
PTPDC1-204ENST00000620992 A0A1W2PRD5 423 aa7.46□□□□□ -1.21
PTPDC1-204ENST00000620992 A0A1W2PRF3 423 aa7.46□□□□□ -1.21
PTPDC1-204ENST00000620992 A0A1W2PRM7 423 aa7.46□□□□□ -1.21
PTPDC1-204ENST00000620992 YKT6O15498 198 aa7.46□□□□□ -1.21
PTPDC1-204ENST00000620992 ICMTO60725 284 aa7.46□□□□□ -1.21
PTPDC1-204ENST00000620992 FBXO24O75426 580 aa7.46□□□□□ -1.21
PTPDC1-204ENST00000620992 IFNA5P01569 189 aa7.46□□□□□ -1.21
PTPDC1-204ENST00000620992 CRYAAP02489 173 aa7.46□□□□□ -1.21
PTPDC1-204ENST00000620992 IFNA4P05014 189 aa7.46□□□□□ -1.21
PTPDC1-204ENST00000620992 CT62P0C5K7 136 aa7.46□□□□□ -1.21
PTPDC1-204ENST00000620992 HIST1H1CP16403 213 aaKnown RBP7.46□□□□□ -1.21
PTPDC1-204ENST00000620992 BTG1P62324 171 aa7.46□□□□□ -1.21
PTPDC1-204ENST00000620992 RPL11P62913 178 aaKnown RBP7.46□□□□□ -1.21
PTPDC1-204ENST00000620992 TRAM1Q15629 374 aa7.46□□□□□ -1.21
PTPDC1-204ENST00000620992 NPSR1Q6W5P4 371 aa7.46□□□□□ -1.21
PTPDC1-204ENST00000620992 GRINAQ7Z429 371 aa7.46□□□□□ -1.21
PTPDC1-204ENST00000620992 C9orf62Q8N4C0 152 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms