RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 NAAAQ02083 359 aa17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 PNLIPRP3Q17RR3 467 aa17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 TMPPEQ6ZT21 453 aa17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 BAP18Q8IXM2 172 aa17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 CHST4Q8NCG5 386 aa17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 FAM46BQ96A09 425 aa17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 RRNAD1Q96FB5 475 aaKnown RBP17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 RNF126Q9BV68 326 aa17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 PNO1Q9NRX1 252 aaKnown RBP17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 FRG2CA6NGY1 282 aa17.49■□□□□ 0.39
PDLIM3-212ENST00000620787 IGHMP01871 453 aa17.49■□□□□ 0.39
PDLIM3-212ENST00000620787 NPBWR1P48145 328 aa17.49■□□□□ 0.39
PDLIM3-212ENST00000620787 QRFPP83859 136 aa17.49■□□□□ 0.39
PDLIM3-212ENST00000620787 ZP2Q05996 745 aa17.49■□□□□ 0.39
PDLIM3-212ENST00000620787 SPAG16Q8N0X2 631 aa17.49■□□□□ 0.39
PDLIM3-212ENST00000620787 RNF141Q8WVD5 230 aa17.49■□□□□ 0.39
PDLIM3-212ENST00000620787 SLC46A1Q96NT5 459 aa17.49■□□□□ 0.39
PDLIM3-212ENST00000620787 CNTNAP3BQ96NU0 1288 aa17.49■□□□□ 0.39
PDLIM3-212ENST00000620787 C13orf42A0A1B0GVH6 325 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 GLO1Q04760 184 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 COL13A1Q5TAT6 717 aaPredicted RBP17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 ELP5Q8TE02 316 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 TMED6Q8WW62 240 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 NMES1Q9C002 83 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 LHX6Q9UPM6 363 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 A0A0B4J2A0 478 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 NUDT19A8MXV4 375 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 P2RY10O00398 339 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 NPIPB7O75200 414 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 NUDT14O95848 222 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 MST1LQ2TV78 715 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 NKAPLQ5M9Q1 402 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 RTN4RL2Q86UN3 420 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 ZSCAN4Q8NAM6 433 aaPredicted RBP17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 PHOSPHO2Q8TCD6 241 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 ADIPOR1Q96A54 375 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 USB1Q9BQ65 265 aaKnown RBP17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 OR8D2Q9GZM6 311 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 MMP26Q9NRE1 261 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 SHPKQ9UHJ6 478 aa17.48■□□□□ 0.39
PDLIM3-212ENST00000620787 H0YIZ8 118 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 PLPP3O14495 311 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 FAM157CP0CG43 387 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 GNB3P16520 340 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 AIMP2Q13155 320 aaKnown RBP17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 ZNF704Q6ZNC4 412 aaPredicted RBP17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 ST7LQ8TDW4 575 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 RELTQ969Z4 430 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 MAP3K3Q99759 626 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 TMEM231Q9H6L2 316 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 IFT22Q9H7X7 185 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 ATPIF1Q9UII2 106 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 SSX5O60225 188 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 SNAPINO95295 136 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 GP1BBP13224 206 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 CX3CR1P49238 355 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 TMEM244Q5VVB8 128 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 DCXRQ7Z4W1 244 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 HOGA1Q86XE5 327 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 LINC00346Q8IVM7 164 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 SLC26A10Q8NG04 563 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 MARCH1Q8TCQ1 289 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 NRSN2Q9GZP1 204 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 BIN3Q9NQY0 253 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 KIAA0100Q14667 2235 aaKnown RBP17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 THADAQ6YHU6 1953 aa17.47■□□□□ 0.39
PDLIM3-212ENST00000620787 TMED7-TICAM2A0A0A6YYA0 188 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 TMEM269A0A1B0GVZ9 245 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 PQLC2LA1A4F0 135 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 PMP2P02689 132 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 VSIG8P0DPA2 414 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 CRABP1P29762 137 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 C1orf61Q13536 156 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 OR52N4Q8NGI2 321 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 FGGYQ96C11 551 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 GAL3ST4Q96RP7 486 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 SEC11CQ9BY50 192 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 TREM1Q9NP99 234 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 LANCL2Q9NS86 450 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 COL5A1P20908 1838 aaPredicted RBP17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 PHF3Q92576 2039 aaKnown RBP17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 BPNT1O95861 308 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 PGCP20142 388 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 HSD11B1P28845 292 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 C1orf140Q5VVS0 124 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 DTWD2Q8NBA8 298 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 OR1M1Q8NGA1 313 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 SLC7A5P2Q9GIP4 190 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 ACKR4Q9NPB9 350 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 UQCC1Q9NVA1 299 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 CTSFQ9UBX1 484 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 HS3ST3A1Q9Y663 406 aa17.46■□□□□ 0.39
PDLIM3-212ENST00000620787 CDC14CA4D256 554 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 IFNA6P05013 189 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 HLA-DOBP13765 273 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 TBPP20226 339 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 CD1CP29017 333 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 GABRA4P48169 554 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 TAS2R31P59538 309 aa17.45■□□□□ 0.38
PDLIM3-212ENST00000620787 IL34Q6ZMJ4 242 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms