RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 TMEM33P57088 247 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 SMIM4Q8WVI0 70 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 NICN1Q9BSH3 213 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 CBLCQ9ULV8 474 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 SLIT3O75094 1523 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ARHGEF28Q8N1W1 1705 aaKnown RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 PPM1DO15297 605 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 DEFB110Q30KQ9 67 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 C20orf196Q8IYI0 205 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 FIBINQ8TAL6 211 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 SHDQ96IW2 340 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 INPP5EQ9NRR6 644 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 NINQ8N4C6 2090 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 CEP250Q9BV73 2442 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF891A8MT65 544 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 DIRC3C9JPN6 131 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 PGCP20142 388 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 EFNB2P52799 333 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 MTCP1P56278 107 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 C9orf135Q5VTT2 229 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 OR10A2Q9H208 303 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ERRFI1Q9UJM3 462 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 MMACHCQ9Y4U1 282 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ANKRD20A5PA0PJZ0 165 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF787Q6DD87 383 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 MRC1P22897 1456 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 A0A1W2PPV4 95 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 GP1BAP07359 652 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ADRA2AP08913 450 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF157P51786 506 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 SLC35B1P78383 322 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 P2RY6Q15077 328 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 MPV17LQ2QL34 196 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ADGRE4PQ86SQ3 457 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 CYB561D1Q8N8Q1 229 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 C2orf50Q96LR7 162 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 NRTNQ99748 197 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 FAM186AA6NE01 2351 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ELOA3CA0A087WX78 387 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 OR2T7P0C7T2 308 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 PIPP12273 146 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 SELLP14151 372 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 BCKDHBP21953 392 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 GRB2P62993 217 aaKnown RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 TSACCQ96A04 125 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ZG16BQ96DA0 208 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 PCGF1Q9BSM1 259 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 KLRF1Q9NZS2 232 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 RCC2Q9P258 522 aaKnown RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF835Q9Y2P0 537 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 NHLRC3Q5JS37 347 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 PRR31Q5SQ13 230 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TPRG1Q6ZUI0 275 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 RTN4IP1Q8WWV3 396 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 OR1E3Q8WZA6 343 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 SH3BGRL3Q9H299 93 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 OPN4Q9UHM6 478 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 ETV7Q9Y603 341 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 B4DEV8 164 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 LIMS3P0CW19 117 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 LIMS4P0CW20 117 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 SRYQ05066 204 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 RFLNBQ8N5W9 214 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 CRYGNQ8WXF5 182 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 B3GALT5Q9Y2C3 310 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 KCNMB2Q9Y691 235 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 LAMB4A4D0S4 1761 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TNFRSF10CO14798 259 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TIAL1Q01085 375 aaKnown RBP eCLIP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 DNM1P34Q6PK57 102 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 IL22RA1Q8N6P7 574 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 WDFY2Q96P53 400 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF587Q96SQ5 575 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 CCL27Q9Y4X3 112 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 BCL9O00512 1426 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 C1orf105O95561 183 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 FZD2Q14332 565 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 AADACL3Q5VUY0 350 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 DMRTC2Q8IXT2 367 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 OR51H1Q8NH63 302 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 ANKRD9Q96BM1 317 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 LPAR4Q99677 370 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 SEC11CQ9BY50 192 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 SMOC1Q9H4F8 434 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 LIPGQ9Y5X9 500 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 KIF1AQ12756 1690 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM212A6NML5 194 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 FFAR1O14842 300 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 SLC16A5O15375 505 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 LPAR6P43657 344 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 CDK5Q00535 292 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 ACOT4Q8N9L9 421 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 OR5M9Q8NGP3 310 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 RAB37Q96AX2 223 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM272A0A1B0GTI8 110 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 CD96P40200 585 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 PHF19Q5T6S3 580 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TCTN3Q6NUS6 607 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 CADM4Q8NFZ8 388 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 ADAMTS18Q8TE60 1221 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms