RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 EMC6Q9BV81 110 aa4.6□□□□□ -1.67
SHMT1-211ENST00000618902 ZCCHC4Q9H5U6 513 aa4.6□□□□□ -1.67
SHMT1-211ENST00000618902 RANBP3Q9H6Z4 567 aaPredicted RBP4.6□□□□□ -1.67
SHMT1-211ENST00000618902 PPP1R3EQ9H7J1 279 aa4.6□□□□□ -1.67
SHMT1-211ENST00000618902 PLEKHF2Q9H8W4 249 aa4.6□□□□□ -1.67
SHMT1-211ENST00000618902 RNF121Q9H920 327 aa4.6□□□□□ -1.67
SHMT1-211ENST00000618902 TRIM36Q9NQ86 728 aa4.6□□□□□ -1.67
SHMT1-211ENST00000618902 NANSQ9NR45 359 aa4.6□□□□□ -1.67
SHMT1-211ENST00000618902 SNTG1Q9NSN8 517 aa4.6□□□□□ -1.67
SHMT1-211ENST00000618902 BABAM2Q9NXR7 383 aa4.6□□□□□ -1.67
SHMT1-211ENST00000618902 TAS2R16Q9NYV7 291 aa4.6□□□□□ -1.67
SHMT1-211ENST00000618902 ABRACLQ9P1F3 81 aa4.6□□□□□ -1.67
SHMT1-211ENST00000618902 RCE1Q9Y256 329 aa4.6□□□□□ -1.67
SHMT1-211ENST00000618902 HIF3AQ9Y2N7 669 aa4.6□□□□□ -1.67
SHMT1-211ENST00000618902 NOSIPQ9Y314 301 aaKnown RBP4.6□□□□□ -1.67
SHMT1-211ENST00000618902 MED31Q9Y3C7 131 aa4.6□□□□□ -1.67
SHMT1-211ENST00000618902 NOX1Q9Y5S8 564 aa4.6□□□□□ -1.67
SHMT1-211ENST00000618902 V9GYH0 126 aa4.6□□□□□ -1.67
SHMT1-211ENST00000618902 IGKV1D-43A0A0B4J1Z2 117 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 TRAV1-2A0A0B4J238 106 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 FAM240BA0A1B0GVZ2 78 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 A0A1W2PPR1 153 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 UNC119BA6NIH7 251 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 NPIPB13A6NJU9 1138 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 OR5H1A6NKK0 313 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 VSTM5A8MXK1 200 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 NPIPB4C9JG80 1138 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 MCIDASD6RGH6 385 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 BLOC1S5-TXNDC5H3BN57 136 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 RPL36A-HNRNPH2H7BZ11 118 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 SURF4O15260 269 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 PLPP2O43688 288 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 GATBO75879 557 aaKnown RBP4.59□□□□□ -1.67
SHMT1-211ENST00000618902 LYZL6O75951 148 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ALX3O95076 343 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 WNT11O96014 354 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 IFNGP01579 166 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 F13BP05160 661 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 GSTT2P0CG29 244 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 GSTT2BP0CG30 244 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 SLC2A2P11168 524 aaPredicted RBP4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF43P17038 809 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 AHCYP23526 432 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 MYL9P24844 172 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 PTAFRP25105 342 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 GTF2E2P29084 291 aaKnown RBP4.59□□□□□ -1.67
SHMT1-211ENST00000618902 MPGP29372 298 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 HOXC12P31275 282 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 NUDT6P53370 316 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 CDH11P55287 796 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 SCAND1P57086 179 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ERVK-25P63136 954 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 MRPS15P82914 257 aaKnown RBP4.59□□□□□ -1.67
SHMT1-211ENST00000618902 POU3F1Q03052 451 aaPredicted RBP4.59□□□□□ -1.67
SHMT1-211ENST00000618902 HSF2Q03933 536 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ANK3Q12955 4377 aaKnown RBP4.59□□□□□ -1.67
SHMT1-211ENST00000618902 IKZF1Q13422 519 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 TNK1Q13470 666 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 GALEQ14376 348 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 MELKQ14680 651 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ACKR1Q16570 336 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 CCDC58Q4VC31 144 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 PYDC2Q56P42 97 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 C9orf135Q5VTT2 229 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 LIPKQ5VXJ0 399 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 CARD17Q5XLA6 110 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 TMEM225Q6GV28 225 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 PYHIN1Q6K0P9 492 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ACSM5Q6NUN0 579 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 NIPAL3Q6P499 406 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 LRFN4Q6PJG9 635 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 TMEM108Q6UXF1 575 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 SLC35D2Q76EJ3 337 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 MEPCEQ7L2J0 689 aaKnown RBP4.59□□□□□ -1.67
SHMT1-211ENST00000618902 AAED1Q7RTV5 226 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 NRARPQ7Z6K4 114 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 PXKQ7Z7A4 578 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 DPPA2Q7Z7J5 298 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 NOXA1Q86UR1 476 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 UEVLDQ8IX04 471 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 C20orf196Q8IYI0 205 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 C1orf174Q8IYL3 243 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF100Q8IYN0 542 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 LNX2Q8N448 690 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF433Q8N7K0 673 aaPredicted RBP4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF611Q8N823 705 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 WDR31Q8NA23 367 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF485Q8NCK3 441 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ANGPTL6Q8NI99 470 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF519Q8TB69 540 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ASB10Q8WXI3 467 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 TMEM54Q969K7 222 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ADAD1Q96M93 576 aaKnown RBP4.59□□□□□ -1.67
SHMT1-211ENST00000618902 WFIKKN1Q96NZ8 548 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 TSPAN32Q96QS1 320 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 KCNS3Q9BQ31 491 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 RHNO1Q9BSD3 238 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 TMEM204Q9BSN7 226 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 KATNB1Q9BVA0 655 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 MRPL13Q9BYD1 178 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms