RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 ATOH1Q92858 354 aaPredicted RBP5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 CPNE2Q96FN4 548 aaPredicted RBP5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 MFRPQ9BY79 579 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 BANF2Q9H503 90 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 MYOTQ9UBF9 498 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 PRELID1Q9Y255 219 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 POLQO75417 2590 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 RALGAPA1Q6GYQ0 2036 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 PRR19A6NJB7 356 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 B8ZZF3 427 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 TGFBR3LH3BV60 316 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 EIF1BO60739 113 aaKnown RBP5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 BPNT1O95861 308 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 SMAD4Q13485 552 aaKnown RBP5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 SLC9A3R2Q15599 337 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR4K15Q8NH41 348 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 NAA11Q9BSU3 229 aaPredicted RBP5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 BCL2L14Q9BZR8 327 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 C12orf10Q9HB07 376 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 ANKRD10Q9NXR5 420 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 LRP12Q9Y561 859 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 IGKV1D-42A0A075B6H8 117 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 A0A0G2JK05 382 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF850A8MQ14 1090 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 SHISA8B8ZZ34 492 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 MPZL1O95297 269 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 SULT1A3P0DMM9 295 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 SULT1A4P0DMN0 295 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF250P15622 560 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 DLSTP36957 453 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 MTCP1P56278 107 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 TAF9Q16594 264 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 FAM199XQ6PEV8 388 aaPredicted RBP5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 LURAP1LQ8IV03 231 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 GJC3Q8NFK1 279 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR4S1Q8NGB4 309 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR10K1Q8NGX5 313 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 MRGPRX4Q96LA9 322 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 SGCZQ96LD1 299 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 ST6GALNAC5Q9BVH7 336 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 S1PR5Q9H228 398 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 DLL4Q9NR61 685 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 ABI3Q9P2A4 366 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 OPN4Q9UHM6 478 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 SLC5A6Q9Y289 635 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 TCF20Q9UGU0 1960 aaKnown RBP5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 RAD51DO75771 328 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 TGM6O95932 706 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 PNPP00491 289 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 IL5P05113 134 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 SLC35A1P78382 337 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 MYBPHQ13203 477 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 ABHD17BQ5VST6 288 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 TEX261Q6UWH6 196 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 GLDNQ6ZMI3 551 aaPredicted RBP5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 AAED1Q7RTV5 226 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 LIX1LQ8IVB5 337 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 NAXDQ8IW45 347 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 BOLLQ8N9W6 283 aaKnown RBP5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 STEAP2Q8NFT2 490 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR1M1Q8NGA1 313 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 MFSD8Q8NHS3 518 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 OIT3Q8WWZ8 545 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 NICN1Q9BSH3 213 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 SLC7A11Q9UPY5 501 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 TMEM184BQ9Y519 407 aaPredicted RBP5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 U3KQ87 197 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 GTF3C1Q12789 2109 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 C4orf47A7E2U8 309 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 KRBOX1C9JBD0 128 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 MCRIP1C9JLW8 97 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 CCSO14618 274 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 RER1O15258 196 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 UPK3AO75631 287 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 CTAG2O75638 210 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 ACSM4P0C7M7 580 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 AVPR2P30518 371 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 HERV-K104P61576 105 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 IGLV3-21P80748 117 aaPredicted RBP5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 ALKBH2Q6NS38 261 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 ARSKQ6UWY0 536 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 D2HGDHQ8N465 521 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 RELL2Q8NC24 303 aaPredicted RBP5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR52B4Q8NGK2 314 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 NMNAT2Q9BZQ4 307 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 PLEKHJ1Q9NW61 149 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 PCDHGA9Q9Y5G4 932 aaKnown RBP5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 R4GMQ9 66 aa5.06□□□□□ -1.6
SYNCRIP-204ENST00000616122 IGKV3-11P04433 115 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 ASAH2BP0C7U1 165 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 TMIGD3P0DMS9 266 aaPredicted RBP5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 HLA-DOBP13765 273 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 PTGS2P35354 604 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 SUMO3P55854 103 aaPredicted RBP5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 CLDN6P56747 220 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 BTN1A1Q13410 526 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 LPCAT3Q6P1A2 487 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNRF4Q8WWF5 429 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 GDF15Q99988 308 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms