RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 LIX1LQ8IVB5 337 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 OR13C5Q8NGS8 318 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 HAVCR2Q8TDQ0 301 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 BBC3Q96PG8 261 aaPredicted RBP12.03□□□□□ -0.48
TMEM254-213ENST00000613758 OR2H1Q9GZK4 316 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 PLEK2Q9NYT0 353 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 FBXL3Q9UKT7 428 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 NCOA6Q14686 2063 aaPredicted RBP12.03□□□□□ -0.48
TMEM254-213ENST00000613758 COL6A6A6NMZ7 2263 aa12.02□□□□□ -0.48
TMEM254-213ENST00000613758 POLEQ07864 2286 aa12.02□□□□□ -0.48
TMEM254-213ENST00000613758 A0A075B6Q4 140 aa12.02□□□□□ -0.48
TMEM254-213ENST00000613758 A8MXE2 369 aa12.02□□□□□ -0.48
TMEM254-213ENST00000613758 EEF1E1-BLOC1S5C9J1V9 151 aa12.02□□□□□ -0.48
TMEM254-213ENST00000613758 EEF1E1O43324 174 aaKnown RBP12.02□□□□□ -0.48
TMEM254-213ENST00000613758 CD79AP11912 226 aa12.02□□□□□ -0.48
TMEM254-213ENST00000613758 RORCP51449 518 aa12.02□□□□□ -0.48
TMEM254-213ENST00000613758 HSD17B8Q92506 261 aa12.02□□□□□ -0.48
TMEM254-213ENST00000613758 WNT5BQ9H1J7 359 aa12.02□□□□□ -0.48
TMEM254-213ENST00000613758 TPK1Q9H3S4 243 aa12.02□□□□□ -0.48
TMEM254-213ENST00000613758 NBEAQ8NFP9 2946 aa12.02□□□□□ -0.49
TMEM254-213ENST00000613758 TRBV2A0A0J9YWF9 115 aa12.02□□□□□ -0.49
TMEM254-213ENST00000613758 ZNF503-AS2A6NEH8 195 aa12.02□□□□□ -0.49
TMEM254-213ENST00000613758 CLDN25C9JDP6 229 aa12.02□□□□□ -0.49
TMEM254-213ENST00000613758 J3QRK9 145 aa12.02□□□□□ -0.49
TMEM254-213ENST00000613758 TLE1Q04724 770 aa12.02□□□□□ -0.49
TMEM254-213ENST00000613758 RAB35Q15286 201 aa12.02□□□□□ -0.49
TMEM254-213ENST00000613758 SFRP5Q5T4F7 317 aa12.02□□□□□ -0.49
TMEM254-213ENST00000613758 DPPA2Q7Z7J5 298 aa12.02□□□□□ -0.49
TMEM254-213ENST00000613758 MRGPRGQ86SM5 289 aa12.02□□□□□ -0.49
TMEM254-213ENST00000613758 MS4A15Q8N5U1 240 aa12.02□□□□□ -0.49
TMEM254-213ENST00000613758 GALNT11Q8NCW6 608 aa12.02□□□□□ -0.49
TMEM254-213ENST00000613758 C1orf162Q8NEQ5 155 aaPredicted RBP12.02□□□□□ -0.49
TMEM254-213ENST00000613758 AKR7LQ8NHP1 331 aa12.02□□□□□ -0.49
TMEM254-213ENST00000613758 BOD1Q96IK1 185 aa12.02□□□□□ -0.49
TMEM254-213ENST00000613758 ATF6BQ99941 703 aa12.02□□□□□ -0.49
TMEM254-213ENST00000613758 C6orf62Q9GZU0 229 aaPredicted RBP12.02□□□□□ -0.49
TMEM254-213ENST00000613758 DDX28Q9NUL7 540 aaKnown RBP12.02□□□□□ -0.49
TMEM254-213ENST00000613758 PLEKHB1Q9UF11 243 aaPredicted RBP12.02□□□□□ -0.49
TMEM254-213ENST00000613758 DOK2O60496 412 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 UBL3O95164 117 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 HOXB1P14653 301 aaPredicted RBP12.01□□□□□ -0.49
TMEM254-213ENST00000613758 HSD11B1P28845 292 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 DCTDP32321 178 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 ARR3P36575 388 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 CAV3P56539 151 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 RAB1AP62820 205 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 GRB2P62993 217 aaKnown RBP12.01□□□□□ -0.49
TMEM254-213ENST00000613758 IGFBP7Q16270 282 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 ACSM3Q53FZ2 586 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 PABPC1L2AQ5JQF8 200 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 FAM27D1Q5T7N8 215 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 TMEM53Q6P2H8 277 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 BHLHA15Q7RTS1 189 aaPredicted RBP12.01□□□□□ -0.49
TMEM254-213ENST00000613758 CCDC36Q8IYA8 594 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 OR1F12Q8NHA8 337 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 S100ZQ8WXG8 99 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 NANOS1Q8WY41 292 aaKnown RBP12.01□□□□□ -0.49
TMEM254-213ENST00000613758 BORCS5Q969J3 196 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 KCNS3Q9BQ31 491 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 PDCD1LG2Q9BQ51 273 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 HDHD2Q9H0R4 259 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 NIPAL2Q9H841 368 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 SMIM30A4D0T7 59 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 CTDSP2O14595 271 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 SYNGR3O43761 229 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 PNPP00491 289 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 PRKXP51817 358 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 UBE2NP61088 152 aaKnown RBP12.01□□□□□ -0.49
TMEM254-213ENST00000613758 GALK2Q01415 458 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 ECH1Q13011 328 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 HNRNPA0Q13151 305 aaKnown RBP12.01□□□□□ -0.49
TMEM254-213ENST00000613758 ALKBH1Q13686 389 aaKnown RBP12.01□□□□□ -0.49
TMEM254-213ENST00000613758 ZNF846Q147U1 533 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 FDX2Q6P4F2 183 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 FJX1Q86VR8 437 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 RELL2Q8NC24 303 aaPredicted RBP12.01□□□□□ -0.49
TMEM254-213ENST00000613758 OR2G2Q8NGZ5 317 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 KCNJ15Q99712 375 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 NOX3Q9HBY0 568 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 SLC17A5Q9NRA2 495 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 B3GNT2Q9NY97 397 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 JKAMPQ9P055 326 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 FRRS1LQ9P0K9 344 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 R4GMQ9 66 aa12.01□□□□□ -0.49
TMEM254-213ENST00000613758 TMEM269A0A1B0GVZ9 245 aa12□□□□□ -0.49
TMEM254-213ENST00000613758 OR6C6A6NF89 314 aa12□□□□□ -0.49
TMEM254-213ENST00000613758 CASKO14936 926 aa12□□□□□ -0.49
TMEM254-213ENST00000613758 SRSF10O75494 262 aaKnown RBP12□□□□□ -0.49
TMEM254-213ENST00000613758 PRB1P04280 392 aa12□□□□□ -0.49
TMEM254-213ENST00000613758 MFGE8Q08431 387 aaPredicted RBP12□□□□□ -0.49
TMEM254-213ENST00000613758 GSG1Q2KHT4 349 aa12□□□□□ -0.49
TMEM254-213ENST00000613758 RSPO1Q2MKA7 263 aaPredicted RBP12□□□□□ -0.49
TMEM254-213ENST00000613758 UNQ9370/PRO34162Q6UXP9 181 aa12□□□□□ -0.49
TMEM254-213ENST00000613758 STAC2Q6ZMT1 411 aa12□□□□□ -0.49
TMEM254-213ENST00000613758 CEACAM19Q7Z692 300 aa12□□□□□ -0.49
TMEM254-213ENST00000613758 CPEB3Q8NE35 698 aaKnown RBP12□□□□□ -0.49
TMEM254-213ENST00000613758 PRR7Q8TB68 274 aa12□□□□□ -0.49
TMEM254-213ENST00000613758 RGP1Q92546 391 aaPredicted RBP12□□□□□ -0.49
TMEM254-213ENST00000613758 SMURF1Q9HCE7 757 aa12□□□□□ -0.49
TMEM254-213ENST00000613758 HMG20AQ9NP66 347 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms