RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 SPACA9Q96E40 222 aaPredicted RBP9.78□□□□□ -0.84
FAM3A-221ENST00000612856 SPSB2Q99619 263 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 LANCL2Q9NS86 450 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 CHRNA9Q9UGM1 479 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 COL4A4P53420 1690 aaPredicted RBP9.78□□□□□ -0.84
FAM3A-221ENST00000612856 CD63P08962 238 aa9.77□□□□□ -0.84
FAM3A-221ENST00000612856 PATE4P0C8F1 98 aa9.77□□□□□ -0.84
FAM3A-221ENST00000612856 TMEM225BP0DP42 221 aa9.77□□□□□ -0.84
FAM3A-221ENST00000612856 PTBP1P26599 531 aaKnown RBP eCLIP9.77□□□□□ -0.84
FAM3A-221ENST00000612856 RIDAP52758 137 aaKnown RBP9.77□□□□□ -0.84
FAM3A-221ENST00000612856 FABP9Q0Z7S8 132 aa9.77□□□□□ -0.84
FAM3A-221ENST00000612856 GFRALQ6UXV0 394 aa9.77□□□□□ -0.84
FAM3A-221ENST00000612856 FAM122BQ7Z309 247 aa9.77□□□□□ -0.84
FAM3A-221ENST00000612856 CDH26Q8IXH8 852 aa9.77□□□□□ -0.84
FAM3A-221ENST00000612856 GOT1L1Q8NHS2 421 aaPredicted RBP9.77□□□□□ -0.84
FAM3A-221ENST00000612856 ABHD4Q8TB40 342 aa9.77□□□□□ -0.84
FAM3A-221ENST00000612856 CNN2Q99439 309 aaKnown RBP9.77□□□□□ -0.84
FAM3A-221ENST00000612856 MEPEQ9NQ76 525 aaPredicted RBP9.77□□□□□ -0.84
FAM3A-221ENST00000612856 HIVEP3Q5T1R4 2406 aa9.77□□□□□ -0.84
FAM3A-221ENST00000612856 WNK1Q9H4A3 2382 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 VSTM5A8MXK1 200 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 PRRG2O14669 202 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 SNAPINO95295 136 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 DBHP09172 617 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 FPR3P25089 353 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 NFYBP25208 207 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 HTR5AP47898 357 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 SOX8P57073 446 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 S100A12P80511 92 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 MEP1BQ16820 701 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 LINC00303Q3SY05 128 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 TFAP2EQ6VUC0 442 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 MDGA2Q7Z553 956 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 OR4C15Q8NGM1 316 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 OR52N5Q8NH56 324 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 ZNF75AQ96N20 296 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 DERL3Q96Q80 235 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 WFDC6Q9BQY6 131 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 LMF2Q9BU23 707 aaKnown RBP9.77□□□□□ -0.85
FAM3A-221ENST00000612856 HRASLSQ9HDD0 168 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 PURGQ9UJV8 347 aaKnown RBP9.77□□□□□ -0.85
FAM3A-221ENST00000612856 LSM2Q9Y333 95 aaKnown RBP9.77□□□□□ -0.85
FAM3A-221ENST00000612856 SLC22A31A6NKX4 558 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 GJE1A6NN92 205 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 DNASE2O00115 360 aaPredicted RBP9.77□□□□□ -0.85
FAM3A-221ENST00000612856 WRBO00258 174 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 PRAF2O60831 178 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 PTGFRP43088 359 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 TGFBR3Q03167 851 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 RBPJQ06330 500 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 PDE7AQ13946 482 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 NKPD1Q17RQ9 610 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 NHLRC3Q5JS37 347 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 KMT5CQ86Y97 462 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 OR5AS1Q8N127 324 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 ARMC10Q8N2F6 343 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 FAM26EQ8N5C1 309 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 MUCL1Q96DR8 90 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 C19orf43Q9BQ61 176 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 PARP12Q9H0J9 701 aaKnown RBP9.77□□□□□ -0.85
FAM3A-221ENST00000612856 SLC25A19Q9HC21 320 aa9.77□□□□□ -0.85
FAM3A-221ENST00000612856 LRRK2Q5S007 2527 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 TMEM129A0AVI4 362 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 C7orf66A4D0T2 115 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 GABRA1P14867 456 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 S100PP25815 95 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 CCR9P51686 369 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 LTC4SQ16873 150 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 C5orf46Q6UWT4 87 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 ANKRD37Q7Z713 158 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 OR2Y1Q8NGV0 311 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 OR6S1Q8NH40 331 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 STK35Q8TDR2 534 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 PIGCQ92535 297 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 ESRP2Q9H6T0 727 aaKnown RBP9.76□□□□□ -0.85
FAM3A-221ENST00000612856 ZNF629Q9UEG4 869 aaPredicted RBP9.76□□□□□ -0.85
FAM3A-221ENST00000612856 C4orf51C9J302 202 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 FFAR1O14842 300 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 SEMA7AO75326 666 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 PRPH2P23942 346 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 TSFMP43897 325 aaKnown RBP9.76□□□□□ -0.85
FAM3A-221ENST00000612856 POLR2HP52434 150 aaKnown RBP9.76□□□□□ -0.85
FAM3A-221ENST00000612856 RSPO4Q2I0M5 234 aaPredicted RBP9.76□□□□□ -0.85
FAM3A-221ENST00000612856 ZNF322Q6U7Q0 402 aaPredicted RBP9.76□□□□□ -0.85
FAM3A-221ENST00000612856 FAM57BQ71RH2 274 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 WFDC8Q8IUA0 241 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 LRRC56Q8IYG6 542 aaPredicted RBP9.76□□□□□ -0.85
FAM3A-221ENST00000612856 PUSL1Q8N0Z8 303 aaKnown RBP9.76□□□□□ -0.85
FAM3A-221ENST00000612856 PNLDC1Q8NA58 520 aaKnown RBP9.76□□□□□ -0.85
FAM3A-221ENST00000612856 ZNF501Q96CX3 271 aaPredicted RBP9.76□□□□□ -0.85
FAM3A-221ENST00000612856 MRPS24Q96EL2 167 aaKnown RBP9.76□□□□□ -0.85
FAM3A-221ENST00000612856 LURAP1Q96LR2 239 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 VRK1Q99986 396 aaPredicted RBP9.76□□□□□ -0.85
FAM3A-221ENST00000612856 HES7Q9BYE0 225 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 GHRLQ9UBU3 117 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 PCDHB10Q9UN67 800 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 CENPVL1A0A0U1RR11 272 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 TMEM269A0A1B0GVZ9 245 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 FAM90A27PA6NNH2 459 aa9.76□□□□□ -0.85
FAM3A-221ENST00000612856 NR2C1P13056 603 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms