RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 PPP3R1P63098 170 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 IDNKQ5T6J7 187 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 TSPO2Q5TGU0 170 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 TMEM244Q5VVB8 128 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 SFXN4Q6P4A7 337 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 ADGRE4PQ86SQ3 457 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 ELMOD2Q8IZ81 293 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 PARP16Q8N5Y8 322 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 RBMXL3Q8N7X1 1067 aaKnown RBP7.83□□□□□ -1.16
CCDC47-207ENST00000612558 OR51A4Q8NGJ6 313 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 OR10AC1Q8NH08 325 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 TSEN15Q8WW01 171 aaKnown RBP7.83□□□□□ -1.16
CCDC47-207ENST00000612558 TMEM106AQ96A25 262 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 APH1AQ96BI3 265 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 KCNJ15Q99712 375 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 WACQ9BTA9 647 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 PBOV1Q9GZY1 135 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 TCF7L1Q9HCS4 588 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 GLRX2Q9NS18 164 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 SLC7A10Q9NS82 523 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 COMMD3Q9UBI1 195 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 HHLA2Q9UM44 414 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 CLEC4AQ9UMR7 237 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 DHDHQ9UQ10 334 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 B3GNT3Q9Y2A9 372 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 GTF3C1Q12789 2109 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 OR14I1A6ND48 311 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 ZNF587BE7ETH6 402 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 TMEM127O75204 238 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 FARS2O95363 451 aaKnown RBP7.82□□□□□ -1.16
CCDC47-207ENST00000612558 APOC1P02654 83 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 CD2P06729 351 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 B4GALT1P15291 398 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 APEX1P27695 318 aaKnown RBP7.82□□□□□ -1.16
CCDC47-207ENST00000612558 PSMD7P51665 324 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 PRKXP51817 358 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 PCBD1P61457 104 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 SCRN3Q0VDG4 424 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 CCDC92Q53HC0 331 aaPredicted RBP7.82□□□□□ -1.16
CCDC47-207ENST00000612558 ELFN2Q5R3F8 820 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 STAC2Q6ZMT1 411 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.82□□□□□ -1.16
CCDC47-207ENST00000612558 P4HA3Q7Z4N8 544 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 BTLAQ7Z6A9 289 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 MED12LQ86YW9 2145 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 LAX1Q8IWV1 398 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 ZNF100Q8IYN0 542 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 SLC22A24Q8N4F4 322 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 ASB5Q8WWX0 329 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 FBXO17Q96EF6 278 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 GMPPAQ96IJ6 420 aaPredicted RBP7.82□□□□□ -1.16
CCDC47-207ENST00000612558 SH3GL3Q99963 347 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 MIXL1Q9H2W2 232 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 UPB1Q9UBR1 384 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 NUFIP1Q9UHK0 495 aaKnown RBP7.82□□□□□ -1.16
CCDC47-207ENST00000612558 DAPK2Q9UIK4 370 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 SLC5A6Q9Y289 635 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 AK6Q9Y3D8 172 aaKnown RBP7.82□□□□□ -1.16
CCDC47-207ENST00000612558 LAMA5O15230 3695 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 PTPRQQ9UMZ3 2332 aa7.82□□□□□ -1.16
CCDC47-207ENST00000612558 CFAP47Q6ZTR5 3102 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 ANKRD11Q6UB99 2663 aaPredicted RBP7.81□□□□□ -1.16
CCDC47-207ENST00000612558 LOC107986453A0A1B0GWG9 222 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 ANKRD61A6NGH8 418 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 AHRRA9YTQ3 701 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 K7EM74 188 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 SGCEO43556 437 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 SLC19A2O60779 497 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 WISP2O76076 250 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 IGHV3-9P01782 118 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 CRYABP02511 175 aaKnown RBP7.81□□□□□ -1.16
CCDC47-207ENST00000612558 TTRP02766 147 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 ACSM4P0C7M7 580 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 THBS2P35442 1172 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 CX3CR1P49238 355 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 UCNP55089 124 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 ZNF121P58317 390 aaPredicted RBP7.81□□□□□ -1.16
CCDC47-207ENST00000612558 ECH1Q13011 328 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 RAB35Q15286 201 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 TBR1Q16650 682 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 SLC25A35Q3KQZ1 300 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 PLEKHN1Q494U1 663 aaPredicted RBP7.81□□□□□ -1.16
CCDC47-207ENST00000612558 ZNF813Q6ZN06 617 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 SLC16A14Q7RTX9 510 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 NUFIP2Q7Z417 695 aaKnown RBP7.81□□□□□ -1.16
CCDC47-207ENST00000612558 ABHD12BQ7Z5M8 362 aaPredicted RBP7.81□□□□□ -1.16
CCDC47-207ENST00000612558 LUZP2Q86TE4 346 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 ZNF283Q8N7M2 679 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 SPTSSAQ969W0 71 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 ORAI1Q96D31 301 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 DIRAS2Q96HU8 199 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 HDHD2Q9H0R4 259 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 SLC25A18Q9H1K4 315 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 PLEK2Q9NYT0 353 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 ABRACLQ9P1F3 81 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 CLCF1Q9UBD9 225 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 ADAM30Q9UKF2 790 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 TIMM10BQ9Y5J6 103 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 V9GY05 133 aa7.81□□□□□ -1.16
CCDC47-207ENST00000612558 DOCK7Q96N67 2140 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms