RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 TMEM185BQ9H7F4 350 aa15.33■□□□□ 0.05
NEK3-206ENST00000611833 POLR1DQ9Y2S0 133 aa15.33■□□□□ 0.05
NEK3-206ENST00000611833 ADAMTS9Q9P2N4 1935 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 B3GALNT1O75752 331 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 MSX1P28360 303 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 HSD11B1P28845 292 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 NR0B2Q15466 257 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 CDNFQ49AH0 187 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 THEM4Q5T1C6 240 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 ATPAF1Q5TC12 328 aaPredicted RBP15.33■□□□□ 0.04
NEK3-206ENST00000611833 CD163Q86VB7 1156 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 FJX1Q86VR8 437 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 STEAP2Q8NFT2 490 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 OR1M1Q8NGA1 313 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 OR1J2Q8NGS2 313 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 SCARB1Q8WTV0 552 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 AQP3Q92482 292 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 CLDN23Q96B33 292 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 ADAT3Q96EY9 351 aaPredicted RBP15.33■□□□□ 0.04
NEK3-206ENST00000611833 SLC6A7Q99884 636 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 MFFQ9GZY8 342 aa15.33■□□□□ 0.04
NEK3-206ENST00000611833 LY6G6EA0A0G2JKS1 128 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 A0A1W2PNV4 684 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 CCL7P80098 99 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 GK2Q14410 553 aaPredicted RBP15.32■□□□□ 0.04
NEK3-206ENST00000611833 MEF2DQ14814 521 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 PLPPR5Q32ZL2 321 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 CLVS2Q5SYC1 327 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 PTCRAQ6ISU1 281 aaPredicted RBP15.32■□□□□ 0.04
NEK3-206ENST00000611833 TRAPPC6BQ86SZ2 158 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 GPAT4Q86UL3 456 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 SLC22A24Q8N4F4 322 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 OR10G3Q8NGC4 313 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 OR5D14Q8NGL3 314 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 CMBLQ96DG6 245 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 PTGES2Q9H7Z7 377 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 B3GAT1Q9P2W7 334 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 RARRES3Q9UL19 164 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 RHBDD3Q9Y3P4 386 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 U3KQA8 63 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 B8ZZF3 427 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 ETV2O00321 342 aaPredicted RBP15.32■□□□□ 0.04
NEK3-206ENST00000611833 ZFAND5O76080 213 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 PTGDSP41222 190 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 INPP5JQ15735 1006 aaPredicted RBP15.32■□□□□ 0.04
NEK3-206ENST00000611833 ZNF260Q3ZCT1 412 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 RNASE10Q5GAN6 216 aaKnown RBP15.32■□□□□ 0.04
NEK3-206ENST00000611833 ZNF385CQ66K41 422 aaPredicted RBP15.32■□□□□ 0.04
NEK3-206ENST00000611833 LCN10Q6JVE6 187 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 C17orf107Q6ZR85 190 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 CPEB2Q7Z5Q1 589 aaKnown RBP15.32■□□□□ 0.04
NEK3-206ENST00000611833 OR2AJ1Q8NGZ0 328 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 MRPL13Q9BYD1 178 aaKnown RBP15.32■□□□□ 0.04
NEK3-206ENST00000611833 FBXO4Q9UKT5 387 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 CACNA1EQ15878 2313 aa15.32■□□□□ 0.04
NEK3-206ENST00000611833 IGHV5-10-1A0A0J9YXX1 117 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 RFPL4AA6NLU0 287 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 POM121CA8CG34 1229 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 RFPL4AL1F8VTS6 287 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 RAB27BO00194 218 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 SMAD9O15198 467 aaKnown RBP15.31■□□□□ 0.04
NEK3-206ENST00000611833 OR2J2O76002 312 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 PNLIPP16233 465 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 RAB3AP20336 220 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 EPHA8P29322 1005 aaPredicted RBP15.31■□□□□ 0.04
NEK3-206ENST00000611833 CLDN6P56747 220 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 CXADRP78310 365 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 DHRS2Q13268 280 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 TAF13Q15543 124 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 NAXDQ8IW45 347 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 BEST3Q8N1M1 668 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.31■□□□□ 0.04
NEK3-206ENST00000611833 OR10S1Q8NGN2 331 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 OR13C9Q8NGT0 318 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 POC1BQ8TC44 478 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 EDAQ92838 391 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 CXorf58Q96LI9 332 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 SPSB2Q99619 263 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 PRRT1Q99946 306 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 MYOZ1Q9NP98 299 aaPredicted RBP15.31■□□□□ 0.04
NEK3-206ENST00000611833 FANCFQ9NPI8 374 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 SDHAF2Q9NX18 166 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 KLHL13Q9P2N7 655 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 MYOTQ9UBF9 498 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 SPEF1Q9Y4P9 236 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 WIF1Q9Y5W5 379 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 TNRC18O15417 2968 aaPredicted RBP15.31■□□□□ 0.04
NEK3-206ENST00000611833 LOC100509620A0A075B734 347 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 BPNT1O95861 308 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 IGHG1P01857 330 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 NMBP08949 121 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 RPA2P15927 270 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 ZNF20P17024 532 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 CD34P28906 385 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 UNC119Q13432 240 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 LY6G6FQ5SQ64 297 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 PHF19Q5T6S3 580 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 CARD17Q5XLA6 110 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 LIN54Q6MZP7 749 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 TMEM65Q6PI78 240 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms