RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 MFAP5Q13361 173 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 ZNF468Q5VIY5 522 aaPredicted RBP10.58□□□□□ -0.72
USP6NL-206ENST00000609853 SLC25A25Q6KCM7 469 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 ZNF529Q6P280 563 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 MTFR2Q6P444 385 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 ZNF813Q6ZN06 617 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 PGAP1Q75T13 922 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 TMEM123Q8N131 208 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 BEST3Q8N1M1 668 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 SLC22A24Q8N4F4 322 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 JAGN1Q8N5M9 183 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 ASCC1Q8N9N2 400 aaKnown RBP10.58□□□□□ -0.72
USP6NL-206ENST00000609853 GJC3Q8NFK1 279 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 FGGYQ96C11 551 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 GON7Q9BXV9 100 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 BEX2Q9BXY8 128 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 ATG5Q9H1Y0 275 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 RANBP3Q9H6Z4 567 aaPredicted RBP10.58□□□□□ -0.72
USP6NL-206ENST00000609853 METTL17Q9H7H0 456 aaPredicted RBP10.58□□□□□ -0.72
USP6NL-206ENST00000609853 PAQR5Q9NXK6 330 aaPredicted RBP10.58□□□□□ -0.72
USP6NL-206ENST00000609853 ASH2LQ9UBL3 628 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 FBLN5Q9UBX5 448 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 RAB22AQ9UL26 194 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 TRAV18A0A075B6X5 111 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 A0A0J9YW62 118 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 DCDC2BA2VCK2 349 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 C9orf172C9J069 976 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 CDK2AP1O14519 115 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 GMDSO60547 372 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 BPNT1O95861 308 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 ANXA3P12429 323 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 RAB3AP20336 220 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 CCL1P22362 96 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 CDAP32320 146 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 ZNF84P51523 738 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 EFNB2P52799 333 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 B3GALT5-AS1P59052 145 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 RPS18P62269 152 aaKnown RBP10.58□□□□□ -0.72
USP6NL-206ENST00000609853 SPOCK1Q08629 439 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 FCN2Q15485 313 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 FAM189A2Q15884 450 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 SFRP4Q6FHJ7 346 aaPredicted RBP10.58□□□□□ -0.72
USP6NL-206ENST00000609853 OR1M1Q8NGA1 313 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 GIMAP1Q8WWP7 306 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 SLC39A7Q92504 469 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 ITFG2Q969R8 447 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 IP6K3Q96PC2 410 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 NUDT16L1Q9BRJ7 211 aaKnown RBP10.58□□□□□ -0.72
USP6NL-206ENST00000609853 B3GNT4Q9C0J1 378 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 PNRC2Q9NPJ4 139 aaKnown RBP10.58□□□□□ -0.72
USP6NL-206ENST00000609853 PCDHGA1Q9Y5H4 931 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 MRPS18BQ9Y676 258 aaKnown RBP10.58□□□□□ -0.72
USP6NL-206ENST00000609853 BDP1A6H8Y1 2624 aa10.58□□□□□ -0.72
USP6NL-206ENST00000609853 A0A1B0GTI1 187 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 DHHO43323 396 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 ICMTO60725 284 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 NDUFB6O95139 128 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 IL5P05113 134 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 LPLP06858 475 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 AKAIN1P0CW23 69 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 SULT1A3P0DMM9 295 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 SULT1A4P0DMN0 295 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 ZNF20P17024 532 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 ENPP1P22413 925 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 AVPR2P30518 371 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 GNALP38405 381 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 GSK3AP49840 483 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 HIST1H3AP68431 136 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 PLA2G7Q13093 441 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 SF3B4Q15427 424 aaKnown RBP eCLIP10.57□□□□□ -0.72
USP6NL-206ENST00000609853 PCGF3Q3KNV8 242 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 HIST2H3PS2Q5TEC6 136 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 HIST2H3AQ71DI3 136 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 DOK3Q7L591 496 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 OR51A2Q8NGJ7 313 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 OR14L1PQ8NHC6 308 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 GPX8Q8TED1 209 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 GCDHQ92947 438 aaPredicted RBP10.57□□□□□ -0.72
USP6NL-206ENST00000609853 NOX3Q9HBY0 568 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 GPN1Q9HCN4 374 aaPredicted RBP10.57□□□□□ -0.72
USP6NL-206ENST00000609853 FOXD3Q9UJU5 478 aaPredicted RBP10.57□□□□□ -0.72
USP6NL-206ENST00000609853 SLC5A6Q9Y289 635 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 SDK2Q58EX2 2172 aa10.57□□□□□ -0.72
USP6NL-206ENST00000609853 NCOA6Q14686 2063 aaPredicted RBP10.56□□□□□ -0.72
USP6NL-206ENST00000609853 SNRPGP15A8MWD9 76 aa10.56□□□□□ -0.72
USP6NL-206ENST00000609853 G3V3Y1 287 aa10.56□□□□□ -0.72
USP6NL-206ENST00000609853 CDX4O14627 284 aaPredicted RBP10.56□□□□□ -0.72
USP6NL-206ENST00000609853 TNFSF11O14788 317 aa10.56□□□□□ -0.72
USP6NL-206ENST00000609853 RER1O15258 196 aa10.56□□□□□ -0.72
USP6NL-206ENST00000609853 SNAPC5O75971 98 aa10.56□□□□□ -0.72
USP6NL-206ENST00000609853 MT-CO3P00414 261 aa10.56□□□□□ -0.72
USP6NL-206ENST00000609853 ALDOBP05062 364 aa10.56□□□□□ -0.72
USP6NL-206ENST00000609853 CNR1P21554 472 aa10.56□□□□□ -0.72
USP6NL-206ENST00000609853 RCVRNP35243 200 aa10.56□□□□□ -0.72
USP6NL-206ENST00000609853 CX3CR1P49238 355 aa10.56□□□□□ -0.72
USP6NL-206ENST00000609853 CARD18P57730 90 aa10.56□□□□□ -0.72
USP6NL-206ENST00000609853 ZNF121P58317 390 aaPredicted RBP10.56□□□□□ -0.72
USP6NL-206ENST00000609853 RBMS2Q15434 407 aaKnown RBP10.56□□□□□ -0.72
USP6NL-206ENST00000609853 SGCAQ16586 387 aa10.56□□□□□ -0.72
USP6NL-206ENST00000609853 C20orf196Q8IYI0 205 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms