RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 FGD2Q7Z6J4 655 aa14.07□□□□□ -0.16
CTSA-214ENST00000606788 PIAS4Q8N2W9 510 aaPredicted RBP14.07□□□□□ -0.16
CTSA-214ENST00000606788 ASCC1Q8N9N2 400 aaKnown RBP14.07□□□□□ -0.16
CTSA-214ENST00000606788 OR4C16Q8NGL9 310 aa14.07□□□□□ -0.16
CTSA-214ENST00000606788 RAB40AQ8WXH6 277 aa14.07□□□□□ -0.16
CTSA-214ENST00000606788 ZNF845Q96IR2 970 aaPredicted RBP14.07□□□□□ -0.16
CTSA-214ENST00000606788 LOC100289279A0A1B0GTE1 492 aa14.07□□□□□ -0.16
CTSA-214ENST00000606788 AQP7P3A6NL99 342 aa14.07□□□□□ -0.16
CTSA-214ENST00000606788 ACOT7O00154 380 aa14.07□□□□□ -0.16
CTSA-214ENST00000606788 PSMB1P20618 241 aaKnown RBP14.07□□□□□ -0.16
CTSA-214ENST00000606788 TRA2AQ13595 282 aaKnown RBP eCLIP14.07□□□□□ -0.16
CTSA-214ENST00000606788 ACER2Q5QJU3 275 aa14.07□□□□□ -0.16
CTSA-214ENST00000606788 OR51S1Q8NGJ8 323 aa14.07□□□□□ -0.16
CTSA-214ENST00000606788 RNF138Q8WVD3 245 aa14.07□□□□□ -0.16
CTSA-214ENST00000606788 MOV10Q9HCE1 1003 aaKnown RBP14.07□□□□□ -0.16
CTSA-214ENST00000606788 PLATP00750 562 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 CELA3AP09093 270 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 GDF1P27539 372 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 NTF4P34130 210 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 DLSTP36957 453 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 SLC35A1P78382 337 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 NHLRC1Q6VVB1 395 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 GTPBP8Q8N3Z3 284 aaPredicted RBP14.06□□□□□ -0.16
CTSA-214ENST00000606788 OR11H4Q8NGC9 324 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 OR8B12Q8NGG6 310 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 PAQR8Q8TEZ7 354 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 SCMH1Q96GD3 660 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 SFXN2Q96NB2 322 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.06□□□□□ -0.16
CTSA-214ENST00000606788 BANF2Q9H503 90 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 IL17BQ9UHF5 180 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 SPENQ96T58 3664 aaKnown RBP14.06□□□□□ -0.16
CTSA-214ENST00000606788 A0A1B0GVI7 797 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 FAM166BA8MTA8 275 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 XRCC3O43542 346 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 ONECUT2O95948 504 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 EIF1P41567 113 aaKnown RBP14.06□□□□□ -0.16
CTSA-214ENST00000606788 GUCA1AP43080 201 aaPredicted RBP14.06□□□□□ -0.16
CTSA-214ENST00000606788 CX3CR1P49238 355 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 TGIF1Q15583 401 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 ZNF101Q8IZC7 436 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 ANGPTL4Q9BY76 406 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 METTL17Q9H7H0 456 aaPredicted RBP14.06□□□□□ -0.16
CTSA-214ENST00000606788 PYCARD-AS1I3L0S3 204 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 ITGA3P26006 1051 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 GZMKP49863 264 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 SUCLG1P53597 346 aaKnown RBP14.06□□□□□ -0.16
CTSA-214ENST00000606788 SCGB2B2Q4G0G5 96 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 SLC25A53Q5H9E4 307 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 ANKRD16Q6P6B7 361 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 C17orf107Q6ZR85 190 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 TMED4Q7Z7H5 227 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 CD163Q86VB7 1156 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 GVQW1Q8N7I0 195 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 GLTPQ9NZD2 209 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 MGAT4AQ9UM21 535 aa14.06□□□□□ -0.16
CTSA-214ENST00000606788 A0A1W2PNV4 684 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 FAM172BPA6NC97 362 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 ZNF20P17024 532 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 SPINK2P20155 84 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 CSRP1P21291 193 aaKnown RBP14.05□□□□□ -0.16
CTSA-214ENST00000606788 PRSS3P35030 304 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 SPEM2Q0P670 501 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 PMPCAQ10713 525 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 BTN2A1Q7KYR7 527 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 M1APQ8TC57 530 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 NUDCD2Q8WVJ2 157 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 DEDD2Q8WXF8 326 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 SNX18Q96RF0 628 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 GINS4Q9BRT9 223 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 CHST6Q9GZX3 395 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 HDGFL3Q9Y3E1 203 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 IGLV3-32A0A0A0MS00 114 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 ANKRD20A5PA0PJZ0 165 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 CDX4O14627 284 aaPredicted RBP14.05□□□□□ -0.16
CTSA-214ENST00000606788 GSTZ1O43708 216 aaPredicted RBP14.05□□□□□ -0.16
CTSA-214ENST00000606788 ACP1P24666 158 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 MAP2K6P52564 334 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 DSCR4P56555 118 aaPredicted RBP14.05□□□□□ -0.16
CTSA-214ENST00000606788 CDCP2Q5VXM1 449 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 FDX2Q6P4F2 183 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 ZNF704Q6ZNC4 412 aaPredicted RBP14.05□□□□□ -0.16
CTSA-214ENST00000606788 CREB3L2Q70SY1 520 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 OR10K1Q8NGX5 313 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 GPER1Q99527 375 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 NICN1Q9BSH3 213 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 MFRPQ9BY79 579 aa14.05□□□□□ -0.16
CTSA-214ENST00000606788 ZNF275Q9NSD4 429 aaPredicted RBP14.05□□□□□ -0.16
CTSA-214ENST00000606788 ZNF878C9JN71 531 aa14.04□□□□□ -0.16
CTSA-214ENST00000606788 PEX14O75381 377 aa14.04□□□□□ -0.16
CTSA-214ENST00000606788 AQP8O94778 261 aa14.04□□□□□ -0.16
CTSA-214ENST00000606788 C3AR1Q16581 482 aa14.04□□□□□ -0.16
CTSA-214ENST00000606788 SFRP5Q5T4F7 317 aa14.04□□□□□ -0.16
CTSA-214ENST00000606788 TMEM244Q5VVB8 128 aa14.04□□□□□ -0.16
CTSA-214ENST00000606788 OLFML2AQ68BL7 652 aa14.04□□□□□ -0.16
CTSA-214ENST00000606788 OR52W1Q6IF63 320 aa14.04□□□□□ -0.16
CTSA-214ENST00000606788 TMEM81Q6P7N7 255 aa14.04□□□□□ -0.16
CTSA-214ENST00000606788 SLC25A47Q6Q0C1 308 aa14.04□□□□□ -0.16
CTSA-214ENST00000606788 BATF2Q8N1L9 274 aa14.04□□□□□ -0.16
CTSA-214ENST00000606788 OR9K2Q8NGE7 335 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms