RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 GADD45GO95257 159 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 FSTL3O95633 263 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 CYB5R3P00387 301 aaPredicted RBP6.39□□□□□ -1.39
CUX1-219ENST00000606749 RENP00797 406 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 ACSM4P0C7M7 580 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 HSD17B1P14061 328 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 HIST1H1CP16403 213 aaKnown RBP6.39□□□□□ -1.39
CUX1-219ENST00000606749 EGR1P18146 543 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 CPT2P23786 658 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 SLC6A6P31641 620 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 CD80P33681 288 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 MSX2P35548 267 aaPredicted RBP6.39□□□□□ -1.39
CUX1-219ENST00000606749 PMELP40967 661 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 SRP9P49458 86 aaKnown RBP6.39□□□□□ -1.39
CUX1-219ENST00000606749 MMP16P51512 607 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 UBA52P62987 128 aaKnown RBP6.39□□□□□ -1.39
CUX1-219ENST00000606749 PAX2Q02962 417 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 ESCO2Q56NI9 601 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 AWAT1Q58HT5 328 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 KLF17Q5JT82 389 aaPredicted RBP6.39□□□□□ -1.39
CUX1-219ENST00000606749 PGM2L1Q6PCE3 622 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 DNM1P34Q6PK57 102 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 CFAP77Q6ZQR2 320 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 NAA40Q86UY6 237 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 ZBTB46Q86UZ6 589 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 JAZF1Q86VZ6 243 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 BCL6BQ8N143 479 aaPredicted RBP6.39□□□□□ -1.39
CUX1-219ENST00000606749 MUC20Q8N307 709 aaPredicted RBP6.39□□□□□ -1.39
CUX1-219ENST00000606749 SIGLECL1Q8N7X8 197 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 SLC26A10Q8NG04 563 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 OR10AD1Q8NGE0 317 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 OR4K13Q8NH42 304 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 FANK1Q8TC84 345 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 PITX2Q99697 317 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 IFT27Q9BW83 186 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 CDADC1Q9BWV3 514 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 C1QTNF5Q9BXJ0 243 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 HDHD2Q9H0R4 259 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 OR52D1Q9H346 318 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 WDR76Q9H967 626 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 RPRD1BQ9NQG5 326 aaKnown RBP6.39□□□□□ -1.39
CUX1-219ENST00000606749 TMEM100Q9NV29 134 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 ZNF69Q9UC07 566 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 CD300AQ9UGN4 299 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 PPIAL4AQ9Y536 164 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 V9GYQ6 96 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 IGHV3-64DA0A0J9YX35 117 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 F5H5K5 113 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 OR10H3O60404 316 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 SNX3O60493 162 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 HLA-DPB1P04440 258 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 SELEP16581 610 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 FPR3P25089 353 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 NOS3P29474 1203 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 GGT2P36268 569 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 IFNGR2P38484 337 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 GSSP48637 474 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 HMGA2P52926 109 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 SPIBQ01892 262 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 ECH1Q13011 328 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 MAB21L1Q13394 359 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 GK2Q14410 553 aaPredicted RBP6.38□□□□□ -1.39
CUX1-219ENST00000606749 ZNF181Q2M3W8 571 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 SLC36A3Q495N2 470 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 ARMCX4Q5H9R4 360 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 FAM201AQ5SY85 155 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 SLC18B1Q6NT16 456 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 RBMS3Q6XE24 437 aaKnown RBP6.38□□□□□ -1.39
CUX1-219ENST00000606749 DOK3Q7L591 496 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 MOGAT3Q86VF5 341 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 KLBQ86Z14 1044 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 LINC00346Q8IVM7 164 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 BHLHE23Q8NDY6 225 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 OR52E2Q8NGJ4 325 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 OR2AJ1Q8NGZ0 328 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 SGMS2Q8NHU3 365 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 GNPDA2Q8TDQ7 276 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 MCUR1Q96AQ8 359 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 ZMYND19Q96E35 227 aaPredicted RBP6.38□□□□□ -1.39
CUX1-219ENST00000606749 C1orf147Q96MC9 270 aaPredicted RBP6.38□□□□□ -1.39
CUX1-219ENST00000606749 CDRT15Q96T59 188 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 DDOQ99489 341 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 ATF6BQ99941 703 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 TMEM246Q9BRR3 403 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 MRI1Q9BV20 369 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 SSBP3Q9BWW4 388 aaPredicted RBP6.38□□□□□ -1.39
CUX1-219ENST00000606749 HCAR1Q9BXC0 346 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 IL1RAPQ9NPH3 570 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 PNRC2Q9NPJ4 139 aaKnown RBP6.38□□□□□ -1.39
CUX1-219ENST00000606749 MRPL22Q9NWU5 206 aaKnown RBP6.38□□□□□ -1.39
CUX1-219ENST00000606749 MIOXQ9UGB7 285 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 CYB5R1Q9UHQ9 305 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 LRCH1Q9Y2L9 728 aa6.38□□□□□ -1.39
CUX1-219ENST00000606749 NBEAL1Q6ZS30 2694 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 KIR2DS1A0A191URI9 304 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 SPRY1O43609 319 aaPredicted RBP6.37□□□□□ -1.39
CUX1-219ENST00000606749 HLA-DQA2P01906 255 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 LCATP04180 440 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 FABP3P05413 133 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 PPIAL4GP0DN37 164 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms