RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 HSD17B7P56937 341 aa7.96□□□□□ -1.13
CSMD1-216ENST00000602557 C5orf46Q6UWT4 87 aa7.96□□□□□ -1.13
CSMD1-216ENST00000602557 METTL9Q9H1A3 318 aa7.96□□□□□ -1.13
CSMD1-216ENST00000602557 DYNLRB1Q9NP97 96 aa7.96□□□□□ -1.13
CSMD1-216ENST00000602557 CCL26Q9Y258 94 aa7.96□□□□□ -1.13
CSMD1-216ENST00000602557 EDN1P05305 212 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 CRYBA1P05813 215 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 BOKQ9UMX3 212 aaPredicted RBP7.96□□□□□ -1.14
CSMD1-216ENST00000602557 PIGLQ9Y2B2 252 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 PAM16Q9Y3D7 125 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 DOCK1Q14185 1865 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 FITM1A5D6W6 292 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 FBLL1A6NHQ2 334 aaKnown RBP7.96□□□□□ -1.14
CSMD1-216ENST00000602557 FOXE1O00358 373 aaPredicted RBP7.96□□□□□ -1.14
CSMD1-216ENST00000602557 P2RY10O00398 339 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 SIAH2O43255 324 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 BMP5P22003 454 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 WDR88Q6ZMY6 472 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 TRILQ7L0X0 811 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 OR4N2Q8NGD1 307 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 OR4A16Q8NH70 328 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 GOT1L1Q8NHS2 421 aaPredicted RBP7.96□□□□□ -1.14
CSMD1-216ENST00000602557 SLC25A21Q9BQT8 299 aaPredicted RBP7.96□□□□□ -1.14
CSMD1-216ENST00000602557 RPL12P30050 165 aaKnown RBP7.96□□□□□ -1.14
CSMD1-216ENST00000602557 PRAMEF20Q5VT98 475 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 SLC16A14Q7RTX9 510 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 BAP18Q8IXM2 172 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 GALR3O60755 368 aaPredicted RBP7.96□□□□□ -1.14
CSMD1-216ENST00000602557 YIF1AO95070 293 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 IGF2P01344 180 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 GABRA4P48169 554 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 CTBSQ01459 385 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 OR8B8Q15620 311 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 THNSL2Q86YJ6 484 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 ZNF552Q9H707 407 aaPredicted RBP7.96□□□□□ -1.14
CSMD1-216ENST00000602557 C1SP09871 688 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 ADRA1AP35348 466 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 PCBP3P57721 371 aaKnown RBP7.96□□□□□ -1.14
CSMD1-216ENST00000602557 LYSMD4Q5XG99 296 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 TMEM179BQ7Z7N9 219 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 GPX8Q8TED1 209 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 NEURL3Q96EH8 262 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 TIMM29Q9BSF4 260 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 BANF2Q9H503 90 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 HCSTQ9UBK5 93 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 TIMM8AO60220 97 aaPredicted RBP7.96□□□□□ -1.14
CSMD1-216ENST00000602557 MRPL33O75394 65 aaKnown RBP7.96□□□□□ -1.14
CSMD1-216ENST00000602557 CCKARP32238 428 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 SELENOPP49908 381 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 BVESQ8NE79 360 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 OR4C16Q8NGL9 310 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 NMNAT3Q96T66 252 aa7.96□□□□□ -1.14
CSMD1-216ENST00000602557 GABARAPH6UMI1 98 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 ZFAND5O76080 213 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 PRPH2P23942 346 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 TSPAN31Q12999 210 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 OR8G1Q15617 311 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 MBOAT2Q6ZWT7 520 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 RGP1Q92546 391 aaPredicted RBP7.95□□□□□ -1.14
CSMD1-216ENST00000602557 RGS13O14921 159 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 JTBO76095 146 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 GLSO94925 669 aaPredicted RBP7.95□□□□□ -1.14
CSMD1-216ENST00000602557 IAPPP10997 89 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 ARL16Q0P5N6 197 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 MLF2Q15773 248 aaPredicted RBP7.95□□□□□ -1.14
CSMD1-216ENST00000602557 NPSR1Q6W5P4 371 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 RHBDD1Q8TEB9 315 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 RLN3Q8WXF3 142 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 WSB2Q9NYS7 404 aaPredicted RBP7.95□□□□□ -1.14
CSMD1-216ENST00000602557 YLPM1P49750 1951 aaKnown RBP7.95□□□□□ -1.14
CSMD1-216ENST00000602557 ABCA4P78363 2273 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 ZNF154Q13106 437 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 SKP2Q13309 424 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 ENDOGQ14249 297 aaKnown RBP7.95□□□□□ -1.14
CSMD1-216ENST00000602557 TMEM255BQ8WV15 326 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 PPP1R1CQ8WVI7 109 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 LMAN1LQ9HAT1 526 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 B3GALT5Q9Y2C3 310 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 ARAP2Q8WZ64 1704 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 MYLKQ15746 1914 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 SPINK4O60575 86 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 OR4E1P0C645 316 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 LBHQ53QV2 105 aaPredicted RBP7.95□□□□□ -1.14
CSMD1-216ENST00000602557 DHRS11Q6UWP2 260 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 SYT13Q7L8C5 426 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 FBXL6Q8N531 539 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 UBL7Q96S82 380 aaPredicted RBP7.95□□□□□ -1.14
CSMD1-216ENST00000602557 ADAT1Q9BUB4 502 aaKnown RBP7.95□□□□□ -1.14
CSMD1-216ENST00000602557 SLC46A2Q9BY10 475 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 ZNF355PQ9NSJ1 428 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 FBXO4Q9UKT5 387 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 TAAR5O14804 337 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 GPRIN2O60269 458 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 MMP11P24347 488 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 AWAT1Q58HT5 328 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 S100A7AQ86SG5 101 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 RBMXL3Q8N7X1 1067 aaKnown RBP7.95□□□□□ -1.14
CSMD1-216ENST00000602557 TMEM104Q8NE00 496 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 MS4A3Q96HJ5 214 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 UBXN10Q96LJ8 280 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms