RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 WDR76Q9H967 626 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 GRHPRQ9UBQ7 328 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 ATPIF1Q9UII2 106 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 RAB21Q9UL25 225 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 A4GNTQ9UNA3 340 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 ADAM18Q9Y3Q7 739 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 A0A0U1RQK1 487 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 C5orf63A6NC05 138 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 G3V4G9 280 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 RER1O15258 196 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 FAM20BO75063 409 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 CTLA4P16410 223 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 LSM6P62312 80 aaKnown RBP13.87□□□□□ -0.19
USE1-208ENST00000600970 ANKDD1AQ495B1 522 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 CLEC12AQ5QGZ9 265 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 METTL11BQ5VVY1 283 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 CALHM3Q86XJ0 350 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 NRMQ8IXM6 262 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 CELF2-AS1Q8N7Q2 184 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 OR13C2Q8NGS9 318 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 ERGIC1Q969X5 290 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 Q96M85 177 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 SIRPDQ9H106 197 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 C16orf95Q9H693 158 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 ERVK-18Q9QC07 812 aa13.87□□□□□ -0.19
USE1-208ENST00000600970 TET2Q6N021 2002 aaPredicted RBP13.86□□□□□ -0.19
USE1-208ENST00000600970 PRSS37A4D1T9 235 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 EFCAB9A8MZ26 197 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 C3orf80F5H4A9 247 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 XKRYO14609 159 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 AHCYL1O43865 530 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 CSF1P09603 554 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 RAD23AP54725 363 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 PRSS12P56730 875 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 PRKCDQ05655 676 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 PRAMEF6Q5VXH4 476 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 NANOGP8Q6NSW7 305 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 GDPGP1Q6ZNW5 385 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 FAM122BQ7Z309 247 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 PNLDC1Q8NA58 520 aaKnown RBP13.86□□□□□ -0.19
USE1-208ENST00000600970 SCCPDHQ8NBX0 429 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 OR11L1Q8NGX0 322 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 PRRC1Q96M27 445 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 MMADHCQ9H3L0 296 aaPredicted RBP13.86□□□□□ -0.19
USE1-208ENST00000600970 TMBIM4Q9HC24 238 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 UFSP2Q9NUQ7 469 aa13.86□□□□□ -0.19
USE1-208ENST00000600970 COA3Q9Y2R0 106 aaPredicted RBP13.86□□□□□ -0.19
USE1-208ENST00000600970 CD14P08571 375 aa13.85□□□□□ -0.19
USE1-208ENST00000600970 ZNF26P17031 533 aaPredicted RBP13.85□□□□□ -0.19
USE1-208ENST00000600970 RPL4P36578 427 aaKnown RBP13.85□□□□□ -0.19
USE1-208ENST00000600970 CD200P41217 278 aa13.85□□□□□ -0.19
USE1-208ENST00000600970 SLC9A3P48764 834 aa13.85□□□□□ -0.19
USE1-208ENST00000600970 MPPED2Q15777 294 aa13.85□□□□□ -0.19
USE1-208ENST00000600970 RABL3Q5HYI8 236 aa13.85□□□□□ -0.19
USE1-208ENST00000600970 SFRP4Q6FHJ7 346 aaPredicted RBP13.85□□□□□ -0.19
USE1-208ENST00000600970 Q6ZPA2 131 aa13.85□□□□□ -0.19
USE1-208ENST00000600970 GLB1L2Q8IW92 636 aa13.85□□□□□ -0.19
USE1-208ENST00000600970 TSPEARQ8WU66 669 aa13.85□□□□□ -0.19
USE1-208ENST00000600970 ZNF570Q96NI8 536 aa13.85□□□□□ -0.19
USE1-208ENST00000600970 ECSITQ9BQ95 431 aa13.85□□□□□ -0.19
USE1-208ENST00000600970 HCAR1Q9BXC0 346 aa13.85□□□□□ -0.19
USE1-208ENST00000600970 DPAGT1Q9H3H5 408 aa13.85□□□□□ -0.19
USE1-208ENST00000600970 RERGLQ9H628 205 aa13.85□□□□□ -0.19
USE1-208ENST00000600970 SMURF1Q9HCE7 757 aa13.85□□□□□ -0.19
USE1-208ENST00000600970 IMPA2O14732 288 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 SLC16A7O60669 478 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 KHDRBS3O75525 346 aaKnown RBP13.84□□□□□ -0.19
USE1-208ENST00000600970 TSPAN9O75954 239 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 IFNA14P01570 189 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 PRB2P02812 416 aaPredicted RBP13.84□□□□□ -0.19
USE1-208ENST00000600970 ARF6P62330 175 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 KCNJ8Q15842 424 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 RSPO1Q2MKA7 263 aaPredicted RBP13.84□□□□□ -0.19
USE1-208ENST00000600970 CYBRD1Q53TN4 286 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 KPRPQ5T749 579 aaPredicted RBP13.84□□□□□ -0.19
USE1-208ENST00000600970 COLCA1Q6ZS62 124 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 PDZD9Q8IXQ8 264 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 PIP4P2Q8N4L2 257 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 FAM156AQ8NDB6 213 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 LRTOMTQ8WZ04 291 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 COQ7Q99807 217 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 SYT4Q9H2B2 425 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 RASSF4Q9H2L5 321 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 RHCGQ9UBD6 479 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 RNF7Q9UBF6 113 aa13.84□□□□□ -0.19
USE1-208ENST00000600970 ZNF816-ZNF321PA0A0X1KG74 233 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 ELOVL7A1L3X0 281 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 LGALS8O00214 317 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 CDC42EP2O14613 210 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 PIN1P1O15428 100 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 ADAM20O43506 726 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 FCN3O75636 299 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 IFNA8P32881 189 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 GPR4P46093 362 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 YAP1P46937 504 aaKnown RBP13.83□□□□□ -0.2
USE1-208ENST00000600970 HIST1H3AP68431 136 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 COX10Q12887 443 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 KRR1Q13601 381 aaKnown RBP13.83□□□□□ -0.2
USE1-208ENST00000600970 KCNMB1Q16558 191 aa13.83□□□□□ -0.2
USE1-208ENST00000600970 LRRC23Q53EV4 343 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms