RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 GPR141Q7Z602 305 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 KLBQ86Z14 1044 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 UBE2J2Q8N2K1 259 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 ZNF485Q8NCK3 441 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 OR13F1Q8NGS4 319 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 OR52N1Q8NH53 320 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 THEM6Q8WUY1 208 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 HSD17B8Q92506 261 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 C4orf36Q96KX1 117 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 OPALINQ96PE5 141 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 REG4Q9BYZ8 158 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 CAB39Q9Y376 341 aaPredicted RBP11.02□□□□□ -0.65
UPF1-208ENST00000600012 PLCE1Q9P212 2302 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 STAB1Q9NY15 2570 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 OR6C65A6NJZ3 312 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 B4GALT1P15291 398 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 ALOX5APP20292 161 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 MRPS34P82930 218 aaKnown RBP11.01□□□□□ -0.65
UPF1-208ENST00000600012 ENDOGQ14249 297 aaKnown RBP11.01□□□□□ -0.65
UPF1-208ENST00000600012 TSC22D1Q15714 1073 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 KCNMB1Q16558 191 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 ZNF672Q499Z4 452 aaPredicted RBP11.01□□□□□ -0.65
UPF1-208ENST00000600012 CDONQ4KMG0 1287 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 ARMCX4Q5H9R4 360 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 TEX30Q5JUR7 227 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 SLC18B1Q6NT16 456 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 KLHL24Q6TFL4 600 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 TMPRSS11AQ6ZMR5 421 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 PLEKHG7Q6ZR37 379 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 DCXRQ7Z4W1 244 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 LRRC18Q8N456 261 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 ZFP41Q8N8Y5 198 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 MAPK1IP1LQ8NDC0 245 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 SNX33Q8WV41 574 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 COG8Q96MW5 612 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 MNTQ99583 582 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 MGLLQ99685 303 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 FOXB1Q99853 325 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 ABHD6Q9BV23 337 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 ZNF416Q9BWM5 594 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 CDADC1Q9BWV3 514 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 NELFAQ9H3P2 528 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 BATF3Q9NR55 127 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 TMEM38BQ9NVV0 291 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 GNG8Q9UK08 70 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 LHFPL6Q9Y693 200 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 TMEM14AQ9Y6G1 99 aa11.01□□□□□ -0.65
UPF1-208ENST00000600012 PNMA8CA0A1B0GUJ8 204 aa11□□□□□ -0.65
UPF1-208ENST00000600012 A6NHS1 94 aa11□□□□□ -0.65
UPF1-208ENST00000600012 E9PI62 339 aa11□□□□□ -0.65
UPF1-208ENST00000600012 RPL36A-HNRNPH2H7BZ11 118 aa11□□□□□ -0.65
UPF1-208ENST00000600012 PHYHO14832 338 aa11□□□□□ -0.65
UPF1-208ENST00000600012 MT-ND5P03915 603 aa11□□□□□ -0.65
UPF1-208ENST00000600012 LIPAP38571 399 aa11□□□□□ -0.65
UPF1-208ENST00000600012 CDKN1AP38936 164 aa11□□□□□ -0.65
UPF1-208ENST00000600012 PSMB10P40306 273 aa11□□□□□ -0.65
UPF1-208ENST00000600012 GUCA1AP43080 201 aaPredicted RBP11□□□□□ -0.65
UPF1-208ENST00000600012 ACTA2P62736 377 aa11□□□□□ -0.65
UPF1-208ENST00000600012 ACTG2P63267 376 aa11□□□□□ -0.65
UPF1-208ENST00000600012 ARF1P84077 181 aaKnown RBP11□□□□□ -0.65
UPF1-208ENST00000600012 BSPH1Q075Z2 132 aa11□□□□□ -0.65
UPF1-208ENST00000600012 PCK2Q16822 640 aa11□□□□□ -0.65
UPF1-208ENST00000600012 FBXW9Q5XUX1 488 aa11□□□□□ -0.65
UPF1-208ENST00000600012 SEZ6L2Q6UXD5 910 aa11□□□□□ -0.65
UPF1-208ENST00000600012 LRRN1Q6UXK5 716 aa11□□□□□ -0.65
UPF1-208ENST00000600012 ZNF813Q6ZN06 617 aa11□□□□□ -0.65
UPF1-208ENST00000600012 CFAP77Q6ZQR2 320 aa11□□□□□ -0.65
UPF1-208ENST00000600012 BHLHA15Q7RTS1 189 aaPredicted RBP11□□□□□ -0.65
UPF1-208ENST00000600012 SSX8Q7RTT4 187 aa11□□□□□ -0.65
UPF1-208ENST00000600012 FAM220AQ7Z4H9 259 aa11□□□□□ -0.65
UPF1-208ENST00000600012 ZNF454Q8N9F8 522 aa11□□□□□ -0.65
UPF1-208ENST00000600012 KBTBD8Q8NFY9 601 aa11□□□□□ -0.65
UPF1-208ENST00000600012 OR52N5Q8NH56 324 aa11□□□□□ -0.65
UPF1-208ENST00000600012 ST7LQ8TDW4 575 aa11□□□□□ -0.65
UPF1-208ENST00000600012 NEUROG1Q92886 237 aa11□□□□□ -0.65
UPF1-208ENST00000600012 MAP6Q96JE9 813 aa11□□□□□ -0.65
UPF1-208ENST00000600012 SH3GL3Q99963 347 aa11□□□□□ -0.65
UPF1-208ENST00000600012 BARX1Q9HBU1 254 aaPredicted RBP11□□□□□ -0.65
UPF1-208ENST00000600012 ACOXLQ9NUZ1 547 aa11□□□□□ -0.65
UPF1-208ENST00000600012 SLCO1C1Q9NYB5 712 aa11□□□□□ -0.65
UPF1-208ENST00000600012 ASH2LQ9UBL3 628 aa11□□□□□ -0.65
UPF1-208ENST00000600012 MALT1Q9UDY8 824 aa11□□□□□ -0.65
UPF1-208ENST00000600012 CYB5R1Q9UHQ9 305 aa11□□□□□ -0.65
UPF1-208ENST00000600012 MRM2Q9UI43 246 aaKnown RBP11□□□□□ -0.65
UPF1-208ENST00000600012 GDF2Q9UK05 429 aaPredicted RBP11□□□□□ -0.65
UPF1-208ENST00000600012 IKZF2Q9UKS7 526 aa11□□□□□ -0.65
UPF1-208ENST00000600012 GRIP1Q9Y3R0 1128 aa11□□□□□ -0.65
UPF1-208ENST00000600012 METTL15A6NJ78 407 aa10.99□□□□□ -0.65
UPF1-208ENST00000600012 CD5LO43866 347 aa10.99□□□□□ -0.65
UPF1-208ENST00000600012 ABHD16AO95870 558 aa10.99□□□□□ -0.65
UPF1-208ENST00000600012 IFNA2P01563 188 aa10.99□□□□□ -0.65
UPF1-208ENST00000600012 IGHV4-39P01824 125 aa10.99□□□□□ -0.65
UPF1-208ENST00000600012 KRT8P05787 483 aa10.99□□□□□ -0.65
UPF1-208ENST00000600012 ITGA5P08648 1049 aa10.99□□□□□ -0.65
UPF1-208ENST00000600012 NPR2P20594 1047 aa10.99□□□□□ -0.65
UPF1-208ENST00000600012 TGFBR2P37173 567 aa10.99□□□□□ -0.65
UPF1-208ENST00000600012 GTF2A1P52655 376 aaPredicted RBP10.99□□□□□ -0.65
UPF1-208ENST00000600012 LSM6P62312 80 aaKnown RBP10.99□□□□□ -0.65
UPF1-208ENST00000600012 MLLT11Q13015 90 aaPredicted RBP10.99□□□□□ -0.65
UPF1-208ENST00000600012 SSX1Q16384 188 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms