RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 PLA2G12AQ9BZM1 189 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 NARFLQ9H6Q4 476 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 SP140LQ9H930 580 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 ARMC1Q9NVT9 282 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 PTTG3PQ9NZH4 202 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 CYB5R1Q9UHQ9 305 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 NOP16Q9Y3C1 178 aaKnown RBP12.05□□□□□ -0.48
LIG1-218ENST00000599322 COL6A5A8TX70 2615 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 CIB2O75838 187 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 NCR1O76036 304 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 ADH4P08319 380 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 DBHP09172 617 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 SPARCP09486 303 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 KITLGP21583 273 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 GRK5P34947 590 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 SLC15A1P46059 708 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 SLC6A9P48067 706 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 ENTPD1P49961 510 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 RAD23AP54725 363 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 MVKQ03426 396 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 CCNIQ14094 377 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 CRMP1Q14194 572 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 GLCCI1Q86VQ1 547 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 OR8D4Q8NGM9 314 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 OR9Q1Q8NGQ5 310 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 OR13G1Q8NGZ3 307 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 YIPF5Q969M3 257 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 NIPSNAP1Q9BPW8 284 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 MSL2Q9HCI7 577 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 CMC2Q9NRP2 79 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 VNN3Q9NY84 501 aa12.04□□□□□ -0.48
LIG1-218ENST00000599322 ISPDA4D126 451 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 TVP23AA6NH52 213 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 ZSCAN5BA6NJL1 495 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 PRR23D1E9PI22 279 aaPredicted RBP12.03□□□□□ -0.48
LIG1-218ENST00000599322 IFNL4K9M1U5 179 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 APOC1P02654 83 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 CD55P08174 381 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 FAM157CP0CG43 387 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 PRR23D2P0DMB1 279 aaPredicted RBP12.03□□□□□ -0.48
LIG1-218ENST00000599322 OSMP13725 252 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 SRP14P37108 136 aaKnown RBP12.03□□□□□ -0.48
LIG1-218ENST00000599322 CDK5R2Q13319 367 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 TRIP10Q15642 601 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 C1orf146Q5VVC0 180 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 FBXW12Q6X9E4 464 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 MRPL21Q7Z2W9 205 aaKnown RBP12.03□□□□□ -0.48
LIG1-218ENST00000599322 TEX29Q8N6K0 151 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 OR51L1Q8NGJ5 315 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 CLDND2Q8NHS1 167 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 NRBF2Q96F24 287 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 COPS4Q9BT78 406 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 PRRG3Q9BZD7 231 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 CENPMQ9NSP4 180 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 IL19Q9UHD0 177 aa12.03□□□□□ -0.48
LIG1-218ENST00000599322 ATRQ13535 2644 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 TCRBV3S1A0A5B6 114 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 M0R135 149 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 ZNF593O00488 134 aaPredicted RBP12.02□□□□□ -0.49
LIG1-218ENST00000599322 RP2O75695 350 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 FCGR1AP12314 374 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 SPI1P17947 270 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 SRD5A1P18405 259 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 HSD11B1P28845 292 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 GGT2P36268 569 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 SRP9P49458 86 aaKnown RBP12.02□□□□□ -0.49
LIG1-218ENST00000599322 DVL1P1P54792 670 aaPredicted RBP12.02□□□□□ -0.49
LIG1-218ENST00000599322 GINS1Q14691 196 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 ACSM5Q6NUN0 579 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 DRAM2Q6UX65 266 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 CFAP77Q6ZQR2 320 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 PGAP1Q75T13 922 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 SHFQ7M4L6 423 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 DCXRQ7Z4W1 244 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 OR5AS1Q8N127 324 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 PAPD5Q8NDF8 572 aaKnown RBP12.02□□□□□ -0.49
LIG1-218ENST00000599322 OR8G5Q8NG78 346 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 OR4Q3Q8NH05 313 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 OR51F2Q8NH61 342 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 SPATA3Q8NHX4 192 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 SPRYD4Q8WW59 207 aaPredicted RBP12.02□□□□□ -0.49
LIG1-218ENST00000599322 ZNF799Q96GE5 643 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 GAL3ST1Q99999 423 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 RBM4Q9BWF3 364 aaKnown RBP12.02□□□□□ -0.49
LIG1-218ENST00000599322 C1QTNF5Q9BXJ0 243 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 CADM1Q9BY67 442 aaKnown RBP12.02□□□□□ -0.49
LIG1-218ENST00000599322 TMEM100Q9NV29 134 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 MRPL22Q9NWU5 206 aaKnown RBP12.02□□□□□ -0.49
LIG1-218ENST00000599322 TREM2Q9NZC2 230 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 TMEFF2Q9UIK5 374 aaPredicted RBP12.02□□□□□ -0.49
LIG1-218ENST00000599322 PCDHB10Q9UN67 800 aa12.02□□□□□ -0.49
LIG1-218ENST00000599322 LRRC30A6NM36 301 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 GYPBP06028 91 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 ACSM4P0C7M7 580 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 FASP25445 335 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 GSTT1P30711 240 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 SCGB2A2Q13296 93 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 TEX30Q5JUR7 227 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 FAM120AOSQ5T036 256 aa12.01□□□□□ -0.49
LIG1-218ENST00000599322 AVPI1Q5T686 147 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms