RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 Q96MF0 132 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 SIGLEC11Q96RL6 698 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 MROQ9BYG7 248 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 OR2H1Q9GZK4 316 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 ACTR6Q9GZN1 396 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 HDHD2Q9H0R4 259 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 MOV10Q9HCE1 1003 aaKnown RBP10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 SLC17A5Q9NRA2 495 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 CENPMQ9NSP4 180 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 GNG8Q9UK08 70 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 CAB39Q9Y376 341 aaPredicted RBP10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 METTL15A6NJ78 407 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 OR5H1A6NKK0 313 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 C16orf97H3BN30 126 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 J3QLW9 94 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 TACSTD2P09758 323 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 LIMS3P0CW19 117 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 LIMS4P0CW20 117 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 ZNF19P17023 458 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 HSD11B1P28845 292 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 UGT2B10P36537 528 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 MAP2K4P45985 399 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 RIDAP52758 137 aaKnown RBP10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 WNT4P56705 351 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 GRB2P62993 217 aaKnown RBP10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 TUBA1BP68363 451 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 TUBA4AP68366 448 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 FAM27E3Q08E93 113 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 ECH1Q13011 328 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 DAZAP2Q15038 168 aaPredicted RBP10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 CDONQ4KMG0 1287 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 TP53I3Q53FA7 332 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 C1QTNF12Q5T7M4 302 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 LRRN1Q6UXK5 716 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 TUBA1AQ71U36 451 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 SSX6Q7RTT6 188 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 ZNF367Q7RTV3 350 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 KCTD20Q7Z5Y7 419 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 P2RY8Q86VZ1 359 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 ZNF679Q8IYX0 411 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 ALDH16A1Q8IZ83 802 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 SYS1Q8N2H4 156 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 YIPF7Q8N8F6 280 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 HAVCR2Q8TDQ0 301 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 RNF133Q8WVZ7 376 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 S100PBPQ96BU1 408 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 MUCL1Q96DR8 90 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 BOD1Q96IK1 185 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 MAP6Q96JE9 813 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 C4orf36Q96KX1 117 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 OR8B4Q96RC9 309 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 ATF6BQ99941 703 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 OR10A4Q9H209 315 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 ZNF224Q9NZL3 707 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 CLEC2DQ9UHP7 191 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 FBXL3Q9UKT7 428 aa10.48□□□□□ -0.73
SHKBP1-213ENST00000597325 IQCMA0A1B0GVH7 501 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 TRIM64BA6NI03 449 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 PSMD9O00233 223 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 PHF1O43189 567 aaPredicted RBP10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 ZNF254O75437 659 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 SULT1C4O75897 302 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 CLPTM1O96005 669 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 PTHP01270 115 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 IFNA2P01563 188 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 ADRA2AP08913 450 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 MMP7P09237 267 aaPredicted RBP10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 PATE4P0C8F1 98 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 SMIM18P0DKX4 95 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 PPP3CBP16298 524 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 PAX7P23759 505 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 HTR5AP47898 357 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 RAB1AP62820 205 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 HIST1H3AP68431 136 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 PSG4Q00888 419 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 ROM1Q03395 351 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 EMX1Q04741 257 aaPredicted RBP10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 MRPL28Q13084 256 aaKnown RBP10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 IRF3Q14653 427 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 MED22Q15528 200 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 NEDD8Q15843 81 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 FBXL19-AS1Q494R0 122 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 PABPC1L2AQ5JQF8 200 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 TIMM23BQ5SRD1 257 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 HIST2H3PS2Q5TEC6 136 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 OR2G6Q5TZ20 316 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 ZNF774Q6NX45 483 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 ZNF544Q6NX49 715 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 DEGS2Q6QHC5 323 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 PRSS57Q6UWY2 283 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 KCTD8Q6ZWB6 473 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 HIST2H3AQ71DI3 136 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 RHOUQ7L0Q8 258 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 VASH1Q7L8A9 365 aaPredicted RBP10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 SSX8Q7RTT4 187 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 MDP1Q86V88 176 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 LRRC75A-AS1Q8N1F1 130 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 NANOGP1Q8N7R0 232 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 OR1F12Q8NHA8 337 aa10.47□□□□□ -0.73
SHKBP1-213ENST00000597325 AKR7LQ8NHP1 331 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms