RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 XKRYO14609 159 aa8.82□□□□□ -1
LIG1-213ENST00000596672 TIPRLO75663 272 aa8.82□□□□□ -1
LIG1-213ENST00000596672 ZNF205O95201 554 aa8.82□□□□□ -1
LIG1-213ENST00000596672 GADD45GO95257 159 aa8.82□□□□□ -1
LIG1-213ENST00000596672 FPR3P25089 353 aa8.82□□□□□ -1
LIG1-213ENST00000596672 RRM2P31350 389 aa8.82□□□□□ -1
LIG1-213ENST00000596672 PYCR1P32322 319 aa8.82□□□□□ -1
LIG1-213ENST00000596672 SRP14P37108 136 aaKnown RBP8.82□□□□□ -1
LIG1-213ENST00000596672 HMGA2P52926 109 aa8.82□□□□□ -1
LIG1-213ENST00000596672 LCN2P80188 198 aa8.82□□□□□ -1
LIG1-213ENST00000596672 SPIBQ01892 262 aa8.82□□□□□ -1
LIG1-213ENST00000596672 SCRN3Q0VDG4 424 aa8.82□□□□□ -1
LIG1-213ENST00000596672 COX10Q12887 443 aa8.82□□□□□ -1
LIG1-213ENST00000596672 AQP6Q13520 282 aa8.82□□□□□ -1
LIG1-213ENST00000596672 ZMYND11Q15326 602 aa8.82□□□□□ -1
LIG1-213ENST00000596672 FAM201AQ5SY85 155 aa8.82□□□□□ -1
LIG1-213ENST00000596672 SLC35F1Q5T1Q4 408 aa8.82□□□□□ -1
LIG1-213ENST00000596672 ACSM5Q6NUN0 579 aa8.82□□□□□ -1
LIG1-213ENST00000596672 FAHD2BQ6P2I3 314 aaPredicted RBP8.82□□□□□ -1
LIG1-213ENST00000596672 LEG1Q6P5S2 330 aa8.82□□□□□ -1
LIG1-213ENST00000596672 ZNF620Q6ZNG0 422 aa8.82□□□□□ -1
LIG1-213ENST00000596672 RRM2BQ7LG56 351 aa8.82□□□□□ -1
LIG1-213ENST00000596672 AMIGO2Q86SJ2 522 aa8.82□□□□□ -1
LIG1-213ENST00000596672 ZBTB46Q86UZ6 589 aa8.82□□□□□ -1
LIG1-213ENST00000596672 PQLC1Q8N2U9 271 aa8.82□□□□□ -1
LIG1-213ENST00000596672 ZNF283Q8N7M2 679 aa8.82□□□□□ -1
LIG1-213ENST00000596672 CYB561A3Q8NBI2 242 aa8.82□□□□□ -1
LIG1-213ENST00000596672 SDR9C7Q8NEX9 313 aa8.82□□□□□ -1
LIG1-213ENST00000596672 OR51F2Q8NH61 342 aa8.82□□□□□ -1
LIG1-213ENST00000596672 FANK1Q8TC84 345 aa8.82□□□□□ -1
LIG1-213ENST00000596672 ELMOD3Q96FG2 381 aa8.82□□□□□ -1
LIG1-213ENST00000596672 FAHD2AQ96GK7 314 aa8.82□□□□□ -1
LIG1-213ENST00000596672 DCLRE1CQ96SD1 692 aaKnown RBP8.82□□□□□ -1
LIG1-213ENST00000596672 NDRG4Q9ULP0 352 aaKnown RBP8.82□□□□□ -1
LIG1-213ENST00000596672 FAM32AQ9Y421 112 aaKnown RBP8.82□□□□□ -1
LIG1-213ENST00000596672 LYVE1Q9Y5Y7 322 aa8.82□□□□□ -1
LIG1-213ENST00000596672 WNK1Q9H4A3 2382 aa8.81□□□□□ -1
LIG1-213ENST00000596672 VWFP04275 2813 aa8.81□□□□□ -1
LIG1-213ENST00000596672 TRAV20A0A0B4J274 112 aa8.81□□□□□ -1
LIG1-213ENST00000596672 A0A1B0GWJ7 208 aa8.81□□□□□ -1
LIG1-213ENST00000596672 F5H0A9 414 aaPredicted RBP8.81□□□□□ -1
LIG1-213ENST00000596672 H3BSA7 217 aa8.81□□□□□ -1
LIG1-213ENST00000596672 BHLHE40O14503 412 aa8.81□□□□□ -1
LIG1-213ENST00000596672 TPD52L2O43399 206 aaKnown RBP8.81□□□□□ -1
LIG1-213ENST00000596672 TIMM8AO60220 97 aaPredicted RBP8.81□□□□□ -1
LIG1-213ENST00000596672 GASTP01350 101 aa8.81□□□□□ -1
LIG1-213ENST00000596672 ACSM4P0C7M7 580 aa8.81□□□□□ -1
LIG1-213ENST00000596672 NR2C1P13056 603 aa8.81□□□□□ -1
LIG1-213ENST00000596672 HNF1AP20823 631 aa8.81□□□□□ -1
LIG1-213ENST00000596672 MAGEA2P43356 314 aa8.81□□□□□ -1
LIG1-213ENST00000596672 TNFAIP6P98066 277 aaPredicted RBP8.81□□□□□ -1
LIG1-213ENST00000596672 PAX2Q02962 417 aa8.81□□□□□ -1
LIG1-213ENST00000596672 LRRC36Q1X8D7 754 aa8.81□□□□□ -1
LIG1-213ENST00000596672 HFEQ30201 348 aa8.81□□□□□ -1
LIG1-213ENST00000596672 FAM98BQ52LJ0 330 aaKnown RBP8.81□□□□□ -1
LIG1-213ENST00000596672 KLF17Q5JT82 389 aaPredicted RBP8.81□□□□□ -1
LIG1-213ENST00000596672 LPCAT4Q643R3 524 aa8.81□□□□□ -1
LIG1-213ENST00000596672 FBXW12Q6X9E4 464 aa8.81□□□□□ -1
LIG1-213ENST00000596672 ADCK1Q86TW2 530 aa8.81□□□□□ -1
LIG1-213ENST00000596672 ZDHHC21Q8IVQ6 265 aa8.81□□□□□ -1
LIG1-213ENST00000596672 RFLNBQ8N5W9 214 aa8.81□□□□□ -1
LIG1-213ENST00000596672 DEFB108BQ8NET1 73 aa8.81□□□□□ -1
LIG1-213ENST00000596672 OR2Z1Q8NG97 314 aa8.81□□□□□ -1
LIG1-213ENST00000596672 OR10AD1Q8NGE0 317 aa8.81□□□□□ -1
LIG1-213ENST00000596672 OR4Q3Q8NH05 313 aa8.81□□□□□ -1
LIG1-213ENST00000596672 ZNF420Q8TAQ5 688 aaPredicted RBP8.81□□□□□ -1
LIG1-213ENST00000596672 DVL3Q92997 716 aaPredicted RBP8.81□□□□□ -1
LIG1-213ENST00000596672 PTP4A1Q93096 173 aa8.81□□□□□ -1
LIG1-213ENST00000596672 WACQ9BTA9 647 aa8.81□□□□□ -1
LIG1-213ENST00000596672 CHID1Q9BWS9 393 aa8.81□□□□□ -1
LIG1-213ENST00000596672 SEMA6AQ9H2E6 1030 aa8.81□□□□□ -1
LIG1-213ENST00000596672 ELOVL3Q9HB03 270 aa8.81□□□□□ -1
LIG1-213ENST00000596672 RPRD1BQ9NQG5 326 aaKnown RBP8.81□□□□□ -1
LIG1-213ENST00000596672 TMEM106BQ9NUM4 274 aa8.81□□□□□ -1
LIG1-213ENST00000596672 ARMC1Q9NVT9 282 aa8.81□□□□□ -1
LIG1-213ENST00000596672 CYB5R1Q9UHQ9 305 aa8.81□□□□□ -1
LIG1-213ENST00000596672 GPR160Q9UJ42 338 aa8.81□□□□□ -1
LIG1-213ENST00000596672 NPTNQ9Y639 398 aa8.81□□□□□ -1
LIG1-213ENST00000596672 MEGF8Q7Z7M0 2845 aa8.81□□□□□ -1
LIG1-213ENST00000596672 PLSCR5A0PG75 271 aa8.8□□□□□ -1
LIG1-213ENST00000596672 TVP23AA6NH52 213 aa8.8□□□□□ -1
LIG1-213ENST00000596672 TMEM178BH3BS89 294 aa8.8□□□□□ -1
LIG1-213ENST00000596672 TCF21O43680 179 aa8.8□□□□□ -1
LIG1-213ENST00000596672 OR10H3O60404 316 aa8.8□□□□□ -1
LIG1-213ENST00000596672 FCN3O75636 299 aa8.8□□□□□ -1
LIG1-213ENST00000596672 PNPP00491 289 aa8.8□□□□□ -1
LIG1-213ENST00000596672 HLA-DPB1P04440 258 aa8.8□□□□□ -1
LIG1-213ENST00000596672 FABP3P05413 133 aa8.8□□□□□ -1
LIG1-213ENST00000596672 SBK2P0C263 348 aa8.8□□□□□ -1
LIG1-213ENST00000596672 CLUP10909 449 aa8.8□□□□□ -1
LIG1-213ENST00000596672 NOS3P29474 1203 aa8.8□□□□□ -1
LIG1-213ENST00000596672 VHLP40337 213 aa8.8□□□□□ -1
LIG1-213ENST00000596672 MMP16P51512 607 aa8.8□□□□□ -1
LIG1-213ENST00000596672 RPS6KA3P51812 740 aa8.8□□□□□ -1
LIG1-213ENST00000596672 TEKQ02763 1124 aa8.8□□□□□ -1
LIG1-213ENST00000596672 TSPAN31Q12999 210 aa8.8□□□□□ -1
LIG1-213ENST00000596672 MOGQ16653 247 aa8.8□□□□□ -1
LIG1-213ENST00000596672 CLEC12AQ5QGZ9 265 aa8.8□□□□□ -1
LIG1-213ENST00000596672 C1QL2Q7Z5L3 287 aa8.8□□□□□ -1
LIG1-213ENST00000596672 TMEM179BQ7Z7N9 219 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms