RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 SGCDQ92629 289 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 GGHQ92820 318 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 OR8B4Q96RC9 309 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 SIGLEC11Q96RL6 698 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 DCLRE1CQ96SD1 692 aaKnown RBP9.07□□□□□ -0.96
LIG1-210ENST00000596332 CNN2Q99439 309 aaKnown RBP9.07□□□□□ -0.96
LIG1-210ENST00000596332 KCNJ15Q99712 375 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 APOL4Q9BPW4 351 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 JAM3Q9BX67 310 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 MRPL37Q9BZE1 423 aaKnown RBP9.07□□□□□ -0.96
LIG1-210ENST00000596332 CDH20Q9HBT6 801 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 FGF20Q9NP95 211 aaPredicted RBP9.07□□□□□ -0.96
LIG1-210ENST00000596332 CENPMQ9NSP4 180 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 METRNQ9UJH8 293 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.07□□□□□ -0.96
LIG1-210ENST00000596332 HEATR1Q9H583 2144 aaKnown RBP9.07□□□□□ -0.96
LIG1-210ENST00000596332 TEX15Q9BXT5 2789 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 ZNF878C9JN71 531 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 F5H5K5 113 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 XPNPEP2O43895 674 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 TMCC2O75069 709 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 OR4A8P0C604 315 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 OR2T7P0C7T2 308 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 LIMS3P0CW19 117 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 LIMS4P0CW20 117 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 DCTDP32321 178 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 PRKXP51817 358 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 CXCR4P61073 352 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 PPP1CBP62140 327 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 GALK2Q01415 458 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 EFNB3Q15768 340 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 C6orf141Q5SZD1 244 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 ZNF544Q6NX49 715 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 DEGS2Q6QHC5 323 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 ZNF322Q6U7Q0 402 aaPredicted RBP9.06□□□□□ -0.96
LIG1-210ENST00000596332 PAMR1Q6UXH9 720 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 C8orf59Q8N0T1 100 aaPredicted RBP9.06□□□□□ -0.96
LIG1-210ENST00000596332 OR1J2Q8NGS2 313 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 OR2T27Q8NH04 317 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 SLC25A40Q8TBP6 338 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 KLF14Q8TD94 323 aaPredicted RBP9.06□□□□□ -0.96
LIG1-210ENST00000596332 RFKQ969G6 155 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 FBXW5Q969U6 566 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 MRPL24Q96A35 216 aaKnown RBP9.06□□□□□ -0.96
LIG1-210ENST00000596332 TBX5Q99593 518 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 SOX7Q9BT81 388 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 TTTY10Q9BZA0 68 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 OR2J1Q9GZK6 312 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 OR51B6Q9H340 312 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 PLK3Q9H4B4 646 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 UBTD1Q9HAC8 227 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 PAK1IP1Q9NWT1 392 aaPredicted RBP9.06□□□□□ -0.96
LIG1-210ENST00000596332 FAM206AQ9NX38 181 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 PSORS1C1Q9UIG5 152 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 ST6GALNAC2Q9UJ37 374 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 POLR1DQ9Y2S0 133 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 GRIP1Q9Y3R0 1128 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 LRP12Q9Y561 859 aa9.06□□□□□ -0.96
LIG1-210ENST00000596332 NOTCH2Q04721 2471 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 A0A1B0GWJ7 208 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 M0R135 149 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 DENRO43583 198 aaKnown RBP9.05□□□□□ -0.96
LIG1-210ENST00000596332 LILRA1O75019 489 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 NDUFS7O75251 213 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 IGLV3-1P01715 115 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 IGHV3-13P01766 116 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 SLC2A1P11166 492 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 PAX1P15863 534 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 SERPINF1P36955 418 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 FABP6P51161 128 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 MFGE8Q08431 387 aaPredicted RBP9.05□□□□□ -0.96
LIG1-210ENST00000596332 RAB40BQ12829 278 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 POU4F2Q12837 409 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 PSG7Q13046 419 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 HLXQ14774 488 aaPredicted RBP9.05□□□□□ -0.96
LIG1-210ENST00000596332 CDONQ4KMG0 1287 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 SPATA46Q5T0L3 261 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 MBNL2Q5VZF2 373 aaKnown RBP9.05□□□□□ -0.96
LIG1-210ENST00000596332 VHLLQ6RSH7 139 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 FBXW12Q6X9E4 464 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 Q6ZR03 302 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 KRTAP1-3Q8IUG1 177 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 ZNF679Q8IYX0 411 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 MUC15Q8N387 334 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 SETD9Q8NE22 299 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 OR1J1Q8NGS3 322 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 ABHD4Q8TB40 342 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 ASB17Q8WXJ9 295 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 GTF3AQ92664 365 aaKnown RBP9.05□□□□□ -0.96
LIG1-210ENST00000596332 SPSB4Q96A44 273 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 SGK3Q96BR1 496 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 HAVCR1Q96D42 359 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 ZNF799Q96GE5 643 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 LYZL4Q96KX0 146 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 Q96MT0 163 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 MNTQ99583 582 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 ISG20L2Q9H9L3 353 aaKnown RBP9.05□□□□□ -0.96
LIG1-210ENST00000596332 ELOVL3Q9HB03 270 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 G6PC2Q9NQR9 355 aa9.05□□□□□ -0.96
LIG1-210ENST00000596332 ZNF701Q9NV72 531 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms