RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 PDCD1LG2Q9BQ51 273 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 SLC22A13Q9Y226 551 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 ZNF281Q9Y2X9 895 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 TRBV5-5A0A0J9YX44 114 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 TMEM269A0A1B0GVZ9 245 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 CIB4A0PJX0 185 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 TMEM212A6NML5 194 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 LOC110117498-PIK3R3F6TDL0 507 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 DVL2O14641 736 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 RAD51DO75771 328 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 RGS9O75916 674 aaPredicted RBP12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 ATE1O95260 518 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 HLA-DPB1P04440 258 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 PSMB1P20618 241 aaKnown RBP12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 HSD11B1P28845 292 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 FGF9P31371 208 aaPredicted RBP12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 CX3CR1P49238 355 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 PRKXP51817 358 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 RAB1AP62820 205 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 TUBA1BP68363 451 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 MRPL49Q13405 166 aaKnown RBP12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 TSC22D1Q15714 1073 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 SOWAHCQ53LP3 525 aaPredicted RBP12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 ZNF544Q6NX49 715 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 UNQ9370/PRO34162Q6UXP9 181 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 STAC2Q6ZMT1 411 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 TUBA1AQ71U36 451 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 BHLHA15Q7RTS1 189 aaPredicted RBP12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 ELMOD2Q8IZ81 293 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 MS4A15Q8N5U1 240 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 GALNT11Q8NCW6 608 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 CPEB3Q8NE35 698 aaKnown RBP12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 OR5AK2Q8NH90 309 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 TMEM203Q969S6 136 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 CHCHD6Q9BRQ6 235 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 CENPOQ9BU64 300 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 TMED9Q9BVK6 235 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 MOB1AQ9H8S9 216 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 RNF121Q9H920 327 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 GALNT8Q9NY28 637 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 NUFIP1Q9UHK0 495 aaKnown RBP12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 OR52A1Q9UKL2 312 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 FAM208BQ5VWN6 2430 aa12.84□□□□□ -0.35
SHKBP1-211ENST00000595945 CHD6Q8TD26 2715 aa12.83□□□□□ -0.35
SHKBP1-211ENST00000595945 M0R135 149 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 CCL21O00585 134 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 GABRPO00591 440 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 SLC22A1O15245 554 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 NOL3O60936 208 aaKnown RBP12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 APOC1P02654 83 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 DBHP09172 617 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 ACSM4P0C7M7 580 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 CD79AP11912 226 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 BMP5P22003 454 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 ANOS1P23352 680 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 HTR5AP47898 357 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 ZNF121P58317 390 aaPredicted RBP12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 VBP1P61758 197 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 HGFACQ04756 655 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 SPCS2Q15005 226 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 CNPY1Q3B7I2 92 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 MDP1Q86V88 176 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 ZNF283Q8N7M2 679 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 OR13C5Q8NGS8 318 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 ABHD4Q8TB40 342 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 SLC7A6Q92536 515 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 SPTSSAQ969W0 71 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 ZNF799Q96GE5 643 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 BBC3Q96PG8 261 aaPredicted RBP12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 PBOV1Q9GZY1 135 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 RNF167Q9H6Y7 350 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 OBP2BQ9NPH6 170 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 TXNL4BQ9NX01 149 aaKnown RBP12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 SSR3Q9UNL2 185 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 PLCE1Q9P212 2302 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 ANKHD1Q8IWZ3 2542 aaKnown RBP12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 ZNF462Q96JM2 2506 aa12.83□□□□□ -0.36
SHKBP1-211ENST00000595945 LOC100509620A0A075B734 347 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 LOC100506127A0A0U1RQW1 187 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 OR5H1A6NKK0 313 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 SERPINA3P01011 423 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 TTRP02766 147 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 ISG15P05161 165 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 UGT2B10P36537 528 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 TGFBR1P36897 503 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 TPTEP56180 551 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 NCS1P62166 190 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 LSM3P62310 102 aaKnown RBP12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 ADORA2A-AS1P86434 159 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 GALK2Q01415 458 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 INSL4Q14641 139 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 GSG1Q2KHT4 349 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 YIF1BQ5BJH7 314 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 BCL2L15Q5TBC7 163 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 DRAM2Q6UX65 266 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 ZNF704Q6ZNC4 412 aaPredicted RBP12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 LUZP2Q86TE4 346 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 ZNF584Q8IVC4 421 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 ALDH16A1Q8IZ83 802 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 ZNF676Q8N7Q3 588 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms