RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 TEX12Q9BXU0 123 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 MSL2Q9HCI7 577 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 CMC2Q9NRP2 79 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 POMPQ9Y244 141 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 TANC2Q9HCD6 1990 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 H3BN98 237 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 IFNL4K9M1U5 179 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 DBHP09172 617 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 SRD5A1P18405 259 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 PAICSP22234 425 aaKnown RBP15.06■□□□□ 0
SHKBP1-204ENST00000594862 IL2RGP31785 369 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 TPTEP56180 551 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 MALLQ13021 153 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 CRMP1Q14194 572 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 TMEM255AQ5JRV8 349 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 FAM120AOSQ5T036 256 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 ZNF362Q5T0B9 420 aaPredicted RBP15.06■□□□□ 0
SHKBP1-204ENST00000594862 COLCA1Q6ZS62 124 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 TEX29Q8N6K0 151 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 OR4Q3Q8NH05 313 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 OR51F2Q8NH61 342 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 ZNF582Q96NG8 517 aaPredicted RBP15.06■□□□□ 0
SHKBP1-204ENST00000594862 C1QTNF5Q9BXJ0 243 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 NMNAT2Q9BZQ4 307 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 DDX28Q9NUL7 540 aaKnown RBP15.06■□□□□ 0
SHKBP1-204ENST00000594862 ARMC1Q9NVT9 282 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 MRPL22Q9NWU5 206 aaKnown RBP15.06■□□□□ 0
SHKBP1-204ENST00000594862 PTTG3PQ9NZH4 202 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 DNAJB9Q9UBS3 223 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 IL19Q9UHD0 177 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 NOP16Q9Y3C1 178 aaKnown RBP15.06■□□□□ 0
SHKBP1-204ENST00000594862 COMMD3-BMI1R4GMX3 469 aa15.06■□□□□ 0
SHKBP1-204ENST00000594862 TCRBV3S1A0A5B6 114 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 FKBP6O75344 327 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 MSMBP08118 114 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 ACSM4P0C7M7 580 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 ANXA8P13928 327 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 PYCR1P32322 319 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 ENTPD1P49961 510 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 CBX1P83916 185 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 BNIP1Q12981 228 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 CR1LQ2VPA4 569 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 TEX30Q5JUR7 227 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 PAPD5Q8NDF8 572 aaKnown RBP15.05■□□□□ -0
SHKBP1-204ENST00000594862 OR8G5Q8NG78 346 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 OR2Z1Q8NG97 314 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 OR13G1Q8NGZ3 307 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 CCL17Q92583 94 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 NIPSNAP1Q9BPW8 284 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 SOX7Q9BT81 388 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 MMADHCQ9H3L0 296 aaPredicted RBP15.05■□□□□ -0
SHKBP1-204ENST00000594862 POFUT1Q9H488 388 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 NARFLQ9H6Q4 476 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 PDP1Q9P0J1 537 aaPredicted RBP15.05■□□□□ -0
SHKBP1-204ENST00000594862 TMEFF2Q9UIK5 374 aaPredicted RBP15.05■□□□□ -0
SHKBP1-204ENST00000594862 WIPI2Q9Y4P8 454 aa15.05■□□□□ -0
SHKBP1-204ENST00000594862 STAB1Q9NY15 2570 aa15.04■□□□□ -0
SHKBP1-204ENST00000594862 MALRD1Q5VYJ5 2156 aa15.04■□□□□ -0
SHKBP1-204ENST00000594862 TRAV20A0A0B4J274 112 aa15.04■□□□□ -0
SHKBP1-204ENST00000594862 F5H5K5 113 aa15.04■□□□□ -0
SHKBP1-204ENST00000594862 M0R135 149 aa15.04■□□□□ -0
SHKBP1-204ENST00000594862 DEAF1O75398 565 aaPredicted RBP15.04■□□□□ -0
SHKBP1-204ENST00000594862 SPI1P17947 270 aa15.04■□□□□ -0
SHKBP1-204ENST00000594862 MVKQ03426 396 aa15.04■□□□□ -0
SHKBP1-204ENST00000594862 PCK2Q16822 640 aa15.04■□□□□ -0
SHKBP1-204ENST00000594862 OR9Q1Q8NGQ5 310 aa15.04■□□□□ -0
SHKBP1-204ENST00000594862 NRBF2Q96F24 287 aa15.04■□□□□ -0
SHKBP1-204ENST00000594862 ZNF799Q96GE5 643 aa15.04■□□□□ -0
SHKBP1-204ENST00000594862 ZNF665Q9H7R5 613 aa15.04■□□□□ -0
SHKBP1-204ENST00000594862 PNRC2Q9NPJ4 139 aaKnown RBP15.04■□□□□ -0
SHKBP1-204ENST00000594862 TREM2Q9NZC2 230 aa15.04■□□□□ -0
SHKBP1-204ENST00000594862 IQCF6A8MYZ5 107 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 GSC2O15499 205 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 LCATP04180 440 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 HMGN1P05114 100 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 SPARCP09486 303 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 SLC15A1P46059 708 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 SRP9P49458 86 aaKnown RBP15.03■□□□□ -0
SHKBP1-204ENST00000594862 LMO4P61968 165 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 SCGB2A2Q13296 93 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 AVPI1Q5T686 147 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 ACSM5Q6NUN0 579 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 DRAM2Q6UX65 266 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 OR6K6Q8NGW6 343 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 TMEM186Q96B77 213 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 MAP6Q96JE9 813 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 GAL3ST1Q99999 423 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 OPA3Q9H6K4 179 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 MXRA5Q9NR99 2828 aa15.03■□□□□ -0
SHKBP1-204ENST00000594862 TVP23AA6NH52 213 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 ZNF878C9JN71 531 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 APOC1P02654 83 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 OSMP13725 252 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 OTX1P32242 354 aaPredicted RBP15.02■□□□□ -0
SHKBP1-204ENST00000594862 SLC6A9P48067 706 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 HLXQ14774 488 aaPredicted RBP15.02■□□□□ -0
SHKBP1-204ENST00000594862 TAF13Q15543 124 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 Q6ZR03 302 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 PGAP1Q75T13 922 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 MRPL21Q7Z2W9 205 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms