RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 VIPAS39Q9H9C1 493 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 ZMAT3Q9HA38 289 aaKnown RBP8.89□□□□□ -0.99
USE1-203ENST00000593597 PNRC2Q9NPJ4 139 aaKnown RBP8.89□□□□□ -0.99
USE1-203ENST00000593597 TUBG2Q9NRH3 451 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 GID8Q9NWU2 228 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 CTSZQ9UBR2 303 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 ATPIF1Q9UII2 106 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 IER3IP1Q9Y5U9 82 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 CAPN7Q9Y6W3 813 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 ENPP4Q9Y6X5 453 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 XKRYO14609 159 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 DIRAS1O95057 198 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 NDUFB2O95178 105 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 PPIAL4GP0DN37 164 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 GUCA1AP43080 201 aaPredicted RBP8.88□□□□□ -0.99
USE1-203ENST00000593597 KRTAP10-3P60369 221 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 ZNF181Q2M3W8 571 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 DEFB112Q30KQ8 113 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 PRAMEF6Q5VXH4 476 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 RUSC1-AS1Q66K80 236 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 TREML4Q6UXN2 200 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 RBMS3Q6XE24 437 aaKnown RBP8.88□□□□□ -0.99
USE1-203ENST00000593597 HDXQ7Z353 690 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.88□□□□□ -0.99
USE1-203ENST00000593597 OR6V1Q8N148 313 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 MUC20Q8N307 709 aaPredicted RBP8.88□□□□□ -0.99
USE1-203ENST00000593597 RAB40AQ8WXH6 277 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 LZICQ8WZA0 190 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 NEIL1Q96FI4 390 aaPredicted RBP8.88□□□□□ -0.99
USE1-203ENST00000593597 DHRS1Q96LJ7 313 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 COQ7Q99807 217 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 MS4A7Q9GZW8 240 aaPredicted RBP8.88□□□□□ -0.99
USE1-203ENST00000593597 FN3KQ9H479 309 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 ANKRD19PQ9H560 264 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 NDUFAF4Q9P032 175 aa8.88□□□□□ -0.99
USE1-203ENST00000593597 KIR2DS1A0A191URI9 304 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 A0A1W2PRQ8 180 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 J3QW42 95 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 SURF4O15260 269 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 HOXA3O43365 443 aaPredicted RBP8.87□□□□□ -0.99
USE1-203ENST00000593597 PPP1R3DO95685 299 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 SEMG1P04279 462 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 ACSM4P0C7M7 580 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 TROVE2P10155 538 aaKnown RBP eCLIP8.87□□□□□ -0.99
USE1-203ENST00000593597 MMP9P14780 707 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 GATA4P43694 442 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 RGS6P49758 472 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 GNB2P62879 340 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 IL13RA1P78552 427 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 DEFA6Q01524 100 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 COX10Q12887 443 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 DGCR6Q14129 220 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 GK2Q14410 553 aaPredicted RBP8.87□□□□□ -0.99
USE1-203ENST00000593597 MPPED2Q15777 294 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 PDLIM3Q53GG5 364 aaPredicted RBP8.87□□□□□ -0.99
USE1-203ENST00000593597 WDR25Q64LD2 544 aaPredicted RBP8.87□□□□□ -0.99
USE1-203ENST00000593597 SLC18B1Q6NT16 456 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 SLC27A4Q6P1M0 643 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 LINC00346Q8IVM7 164 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 SLC26A10Q8NG04 563 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 OR10S1Q8NGN2 331 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 WFDC12Q8WWY7 111 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 APOBEC3DQ96AK3 386 aaPredicted RBP8.87□□□□□ -0.99
USE1-203ENST00000593597 ABCD2Q9UBJ2 740 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 RPS6KA6Q9UK32 745 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 B9D1Q9UPM9 204 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 TMEM5Q9Y2B1 443 aa8.87□□□□□ -0.99
USE1-203ENST00000593597 TNFRSF13BO14836 293 aaPredicted RBP8.86□□□□□ -0.99
USE1-203ENST00000593597 FAM20BO75063 409 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 FSTL3O95633 263 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 H1F0P07305 194 aaKnown RBP8.86□□□□□ -0.99
USE1-203ENST00000593597 SFTPBP07988 381 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 COX4I1P13073 169 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 IFNA8P32881 189 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 GGT2P36268 569 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 PSMB10P40306 273 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 CD200P41217 278 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 PITPNBP48739 271 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 FGF12P61328 243 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 FGD3Q5JSP0 725 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 GPR139Q6DWJ6 353 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 LRRN1Q6UXK5 716 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 DPY19L2P2Q6ZN68 376 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 FKBP9P1Q75LS8 142 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 SPATC1Q76KD6 591 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 RHOUQ7L0Q8 258 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 ARPINQ7Z6K5 226 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 ADCK1Q86TW2 530 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 OR13G1Q8NGZ3 307 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 RP9Q8TA86 221 aaKnown RBP8.86□□□□□ -0.99
USE1-203ENST00000593597 Q8TCH9 128 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 ZNRF4Q8WWF5 429 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 SLC25A28Q96A46 364 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 TMIGD2Q96BF3 282 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 COG8Q96MW5 612 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 ZNF582Q96NG8 517 aaPredicted RBP8.86□□□□□ -0.99
USE1-203ENST00000593597 TBX15Q96SF7 602 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 NMNAT3Q96T66 252 aa8.86□□□□□ -0.99
USE1-203ENST00000593597 NUDT16L1Q9BRJ7 211 aaKnown RBP8.86□□□□□ -0.99
USE1-203ENST00000593597 HDHD2Q9H0R4 259 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms