RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PLEKHA8Q96JA3 519 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 TSSK2Q96PF2 358 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 OR8B2Q96RD0 313 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 NUDT16L1Q9BRJ7 211 aaKnown RBP13.64□□□□□ -0.23
LIG1-205ENST00000593425 CDADC1Q9BWV3 514 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 MRGBPQ9NV56 204 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 TMEM5Q9Y2B1 443 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 POLR1DQ9Y2S0 133 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 LHFPL6Q9Y693 200 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 DCTN6O00399 190 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 SERPINA1P01009 418 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 TROVE2P10155 538 aaKnown RBP eCLIP13.63□□□□□ -0.23
LIG1-205ENST00000593425 CDKN2AP42771 156 aaKnown RBP13.63□□□□□ -0.23
LIG1-205ENST00000593425 HOXA4Q00056 320 aaPredicted RBP13.63□□□□□ -0.23
LIG1-205ENST00000593425 DBPQ10586 325 aaPredicted RBP13.63□□□□□ -0.23
LIG1-205ENST00000593425 RSPO1Q2MKA7 263 aaPredicted RBP13.63□□□□□ -0.23
LIG1-205ENST00000593425 GPR139Q6DWJ6 353 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 CORO6Q6QEF8 472 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 FKBP9P1Q75LS8 142 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 RRM2BQ7LG56 351 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 COQ7Q99807 217 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 NDEL1Q9GZM8 345 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 HDHD2Q9H0R4 259 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 PRDM13Q9H4Q3 707 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 ANKRD19PQ9H560 264 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 TNFRSF19Q9NS68 423 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 FGFR1OP2Q9NVK5 253 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 MMP24Q9Y5R2 645 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 IER3IP1Q9Y5U9 82 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 CAPN7Q9Y6W3 813 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 CMYA5Q8N3K9 4069 aa13.63□□□□□ -0.23
LIG1-205ENST00000593425 A0A1B0GWJ7 208 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 FAM181BA6NEQ2 426 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 LRRC30A6NM36 301 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 SRRM5B3KS81 715 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 C22orf46C9J442 243 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 NME4O00746 187 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 FSTL3O95633 263 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 FPR3P25089 353 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 OMPP47874 163 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 CENPAP49450 140 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 FGF12P61328 243 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 MAB21L1Q13394 359 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 MIDNQ504T8 468 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 WDR25Q64LD2 544 aaPredicted RBP13.62□□□□□ -0.23
LIG1-205ENST00000593425 RUSC1-AS1Q66K80 236 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 ZNF841Q6ZN19 808 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 COLCA1Q6ZS62 124 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 NLRC3Q7RTR2 1065 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 ADCK1Q86TW2 530 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 C1orf87Q8N0U7 546 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 GJC3Q8NFK1 279 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 WFDC12Q8WWY7 111 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 RSRC1Q96IZ7 334 aaKnown RBP13.62□□□□□ -0.23
LIG1-205ENST00000593425 MARCH7Q9H992 704 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 ARMCX1Q9P291 453 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 CLN8Q9UBY8 286 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 RPS6KA6Q9UK32 745 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 ENPP4Q9Y6X5 453 aa13.62□□□□□ -0.23
LIG1-205ENST00000593425 PHYHO14832 338 aa13.61□□□□□ -0.23
LIG1-205ENST00000593425 NCK1P16333 377 aa13.61□□□□□ -0.23
LIG1-205ENST00000593425 GATA4P43694 442 aa13.61□□□□□ -0.23
LIG1-205ENST00000593425 RAD23AP54725 363 aa13.61□□□□□ -0.23
LIG1-205ENST00000593425 RELBQ01201 579 aa13.61□□□□□ -0.23
LIG1-205ENST00000593425 COX10Q12887 443 aa13.61□□□□□ -0.23
LIG1-205ENST00000593425 KRTAP27-1Q3LI81 207 aa13.61□□□□□ -0.23
LIG1-205ENST00000593425 PRAMEF6Q5VXH4 476 aa13.61□□□□□ -0.23
LIG1-205ENST00000593425 CFAP77Q6ZQR2 320 aa13.61□□□□□ -0.23
LIG1-205ENST00000593425 DCDC5Q6ZRR9 648 aa13.61□□□□□ -0.23
LIG1-205ENST00000593425 HDXQ7Z353 690 aa13.61□□□□□ -0.23
LIG1-205ENST00000593425 ARPINQ7Z6K5 226 aa13.61□□□□□ -0.23
LIG1-205ENST00000593425 KIR3DL3Q8N743 410 aa13.61□□□□□ -0.23
LIG1-205ENST00000593425 ZDHHC16Q969W1 377 aa13.61□□□□□ -0.23
LIG1-205ENST00000593425 TMEM100Q9NV29 134 aa13.61□□□□□ -0.23
LIG1-205ENST00000593425 AP3M1Q9Y2T2 418 aa13.61□□□□□ -0.23
LIG1-205ENST00000593425 IGLV1-36A0A0B4J1U3 117 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 TRBV4-1A0A0J9YWV2 114 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 GSTA4O15217 222 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 FAM20BO75063 409 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 PPP1R3DO95685 299 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 TXNDC12O95881 172 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 KNG1P01042 644 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 H1F0P07305 194 aaKnown RBP13.6□□□□□ -0.23
LIG1-205ENST00000593425 GSK3BP49841 420 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 SLC7A2P52569 658 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 RAG2P55895 527 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 GK2Q14410 553 aaPredicted RBP13.6□□□□□ -0.23
LIG1-205ENST00000593425 SEC23BQ15437 767 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 MPPED2Q15777 294 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 FGD3Q5JSP0 725 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 CLEC12AQ5QGZ9 265 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 PGM2L1Q6PCE3 622 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 FIP1L1Q6UN15 594 aaKnown RBP13.6□□□□□ -0.23
LIG1-205ENST00000593425 DPY19L2P2Q6ZN68 376 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 NAA40Q86UY6 237 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 CYP4Z1Q86W10 505 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 LINC00346Q8IVM7 164 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 SLC26A10Q8NG04 563 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 Q8TCH9 128 aa13.6□□□□□ -0.23
LIG1-205ENST00000593425 HCAR1Q9BXC0 346 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms