RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 TMEM91Q6ZNR0 172 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 TUBA1AQ71U36 451 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 SLC16A14Q7RTX9 510 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 DPPA2Q7Z7J5 298 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 CATSPERDQ86XM0 798 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 DOLPP1Q86YN1 238 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 CNEP1R1Q8N9A8 125 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 HSD17B8Q92506 261 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 TRMT61AQ96FX7 289 aaKnown RBP11.78□□□□□ -0.52
VMP1-217ENST00000593168 LURAP1Q96LR2 239 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 KCTD7Q96MP8 289 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 KCNJ15Q99712 375 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 SH3GL3Q99963 347 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 HDHD5Q9BXW7 423 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 DCSTAMPQ9H295 470 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 FBXL3Q9UKT7 428 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 TIMM10BQ9Y5J6 103 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 TACC2O95359 2948 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 MYO7BQ6PIF6 2116 aa11.77□□□□□ -0.52
VMP1-217ENST00000593168 TMEM269A0A1B0GVZ9 245 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 HAX1O00165 279 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 SLC19A2O60779 497 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 SC5DO75845 299 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 GATBO75879 557 aaKnown RBP11.77□□□□□ -0.53
VMP1-217ENST00000593168 PNPP00491 289 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 MMP7P09237 267 aaPredicted RBP11.77□□□□□ -0.53
VMP1-217ENST00000593168 TMIGD3P0DMS9 266 aaPredicted RBP11.77□□□□□ -0.53
VMP1-217ENST00000593168 CD8BP10966 210 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 ZNF182P17025 639 aaPredicted RBP11.77□□□□□ -0.53
VMP1-217ENST00000593168 ZNF32P17041 273 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 FOXG1P55316 489 aaPredicted RBP11.77□□□□□ -0.53
VMP1-217ENST00000593168 PSMA6P60900 246 aaKnown RBP11.77□□□□□ -0.53
VMP1-217ENST00000593168 RPS11P62280 158 aaKnown RBP eCLIP11.77□□□□□ -0.53
VMP1-217ENST00000593168 FOXF2Q12947 444 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 RAB35Q15286 201 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 SLC36A2Q495M3 483 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 WDR38Q5JTN6 314 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 ANKRD16Q6P6B7 361 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 PAMR1Q6UXH9 720 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 UNQ9370/PRO34162Q6UXP9 181 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 PRSS35Q8N3Z0 413 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 IL17RDQ8NFM7 739 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 OR5AK2Q8NH90 309 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 NDNFQ8TB73 568 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 ITLN2Q8WWU7 325 aaPredicted RBP11.77□□□□□ -0.53
VMP1-217ENST00000593168 PHYHIPQ92561 330 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 STARD4Q96DR4 205 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 ATF6BQ99941 703 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 PDCD1LG2Q9BQ51 273 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 DCUN1D5Q9BTE7 237 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 COMMD4Q9H0A8 199 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 HDHD2Q9H0R4 259 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 RNF167Q9H6Y7 350 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 G6PC2Q9NQR9 355 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 PLEK2Q9NYT0 353 aa11.77□□□□□ -0.53
VMP1-217ENST00000593168 SETD2Q9BYW2 2564 aaPredicted RBP11.76□□□□□ -0.53
VMP1-217ENST00000593168 ACOD1A6NK06 481 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 LOC110117498-PIK3R3F6TDL0 507 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 SGCEO43556 437 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 SYNGR3O43761 229 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 IL18BPO95998 194 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 CGAP01215 116 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 APOC1P02654 83 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 ITGA5P08648 1049 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 GLI4P10075 376 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 HSD11B1P28845 292 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 OTX1P32242 354 aaPredicted RBP11.76□□□□□ -0.53
VMP1-217ENST00000593168 TGFBR1P36897 503 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 KIR3DL2P43630 455 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 SERPINB10P48595 397 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 TGFBR3Q03167 851 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 ACSM3Q53FZ2 586 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 C22orf42Q6IC83 251 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 VWA1Q6PCB0 445 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 Q6ZT83 130 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 CEACAM19Q7Z692 300 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 BTLAQ7Z6A9 289 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 CCDC36Q8IYA8 594 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 ZNF676Q8N7Q3 588 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 OR1K1Q8NGR3 316 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 DYNC2LI1Q8TCX1 351 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 BCL2L2Q92843 193 aaPredicted RBP11.76□□□□□ -0.53
VMP1-217ENST00000593168 BOD1Q96IK1 185 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 DCLRE1CQ96SD1 692 aaKnown RBP11.76□□□□□ -0.53
VMP1-217ENST00000593168 MED18Q9BUE0 208 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 OR2H1Q9GZK4 316 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 MOB1AQ9H8S9 216 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 FAM206AQ9NX38 181 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 GALNT8Q9NY28 637 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 OR52A1Q9UKL2 312 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 PROCRQ9UNN8 238 aa11.76□□□□□ -0.53
VMP1-217ENST00000593168 NF1P21359 2839 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 OR6C6A6NF89 314 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 IL1AP01583 271 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 ISG15P05161 165 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 HOXB1P14653 301 aaPredicted RBP11.75□□□□□ -0.53
VMP1-217ENST00000593168 COX5AP20674 150 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 IGHV1-2P23083 117 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 ARR3P36575 388 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 PSG4Q00888 419 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms