RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 OR4C15Q8NGM1 316 aa13.71□□□□□ -0.21
CIRBP-241ENST00000593048 SLC7A13Q8TCU3 470 aa13.71□□□□□ -0.21
CIRBP-241ENST00000593048 MSL2Q9HCI7 577 aa13.71□□□□□ -0.21
CIRBP-241ENST00000593048 TMCC3Q9ULS5 477 aa13.71□□□□□ -0.21
CIRBP-241ENST00000593048 A0A0A6YYJ9 748 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 A0A0G2JMP0 313 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 TEX13CA0A0J9YWL9 993 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 A0A0X1KG70 313 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 SLC16A7O60669 478 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 ICMTO60725 284 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 GADD45GO95257 159 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 IGHV2-5P01817 119 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 TNFSF4P23510 183 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 TNFAIP6P98066 277 aaPredicted RBP13.7□□□□□ -0.22
CIRBP-241ENST00000593048 PSG7Q13046 419 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 KRR1Q13601 381 aaKnown RBP13.7□□□□□ -0.22
CIRBP-241ENST00000593048 TMEM255AQ5JRV8 349 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 GPR139Q6DWJ6 353 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 C1orf94Q6P1W5 598 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 TSEN54Q7Z6J9 526 aaKnown RBP13.7□□□□□ -0.22
CIRBP-241ENST00000593048 NPEPL1Q8NDH3 523 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 OR4M2Q8NGB6 313 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 ZNF418Q8TF45 676 aaPredicted RBP13.7□□□□□ -0.22
CIRBP-241ENST00000593048 RASD2Q96D21 266 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 CNBD2Q96M20 576 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 ZNF556Q9HAH1 456 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 TBCCD1Q9NVR7 557 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 FAM118AQ9NWS6 357 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 PLEK2Q9NYT0 353 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 UBAP1Q9NZ09 502 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 NDUFA13Q9P0J0 144 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 PDP1Q9P0J1 537 aaPredicted RBP13.7□□□□□ -0.22
CIRBP-241ENST00000593048 KIF17Q9P2E2 1029 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 IL20RAQ9UHF4 553 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 MYRFQ9Y2G1 1151 aa13.7□□□□□ -0.22
CIRBP-241ENST00000593048 KHDRBS3O75525 346 aaKnown RBP13.69□□□□□ -0.22
CIRBP-241ENST00000593048 ADH4P08319 380 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 CTLA4P16410 223 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 TUBG1P23258 451 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 SDHAP31040 664 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 IFNGR2P38484 337 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 CENPAP49450 140 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 CSNK2BP67870 215 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 SPIBQ01892 262 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 COX10Q12887 443 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 AQP6Q13520 282 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 DCAF12L2Q5VW00 463 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 FAM122BQ7Z309 247 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 GLB1L2Q8IW92 636 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 C8orf59Q8N0T1 100 aaPredicted RBP13.69□□□□□ -0.22
CIRBP-241ENST00000593048 OR52J3Q8NH60 311 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 ST7LQ8TDW4 575 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 CYGBQ8WWM9 190 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 COG8Q96MW5 612 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 GABARAPL3Q9BY60 117 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 SYT4Q9H2B2 425 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 G6PC2Q9NQR9 355 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 TUBG2Q9NRH3 451 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 KLHL21Q9UJP4 597 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 PCDHB10Q9UN67 800 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 COA3Q9Y2R0 106 aaPredicted RBP13.69□□□□□ -0.22
CIRBP-241ENST00000593048 POLR1DQ9Y2S0 133 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 IER3IP1Q9Y5U9 82 aa13.69□□□□□ -0.22
CIRBP-241ENST00000593048 LOC105371242A0A075B767 164 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 LOC100130705A0A1B0GUX0 176 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 PTP4A3O75365 173 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 RGS9O75916 674 aaPredicted RBP13.68□□□□□ -0.22
CIRBP-241ENST00000593048 CCNB2O95067 398 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 ESRRGP62508 458 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 VASH1Q7L8A9 365 aaPredicted RBP13.68□□□□□ -0.22
CIRBP-241ENST00000593048 THAP5Q7Z6K1 395 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 TMEM179BQ7Z7N9 219 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 ATG16L2Q8NAA4 619 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 OR2Z1Q8NG97 314 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 CMBLQ96DG6 245 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 DCLRE1CQ96SD1 692 aaKnown RBP13.68□□□□□ -0.22
CIRBP-241ENST00000593048 APOL4Q9BPW4 351 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 MRPS26Q9BYN8 205 aaKnown RBP13.68□□□□□ -0.22
CIRBP-241ENST00000593048 TOR3AQ9H497 397 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 NRIP3Q9NQ35 241 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 KRT84Q9NSB2 600 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 ASH2LQ9UBL3 628 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 PURGQ9UJV8 347 aaKnown RBP13.68□□□□□ -0.22
CIRBP-241ENST00000593048 BLOC1S6Q9UL45 172 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 SIGLEC7Q9Y286 467 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 U3KQV3 271 aa13.68□□□□□ -0.22
CIRBP-241ENST00000593048 UNC119BA6NIH7 251 aa13.67□□□□□ -0.22
CIRBP-241ENST00000593048 E9PQ18 207 aa13.67□□□□□ -0.22
CIRBP-241ENST00000593048 J3QLI3 93 aa13.67□□□□□ -0.22
CIRBP-241ENST00000593048 MRPS14O60783 128 aaKnown RBP13.67□□□□□ -0.22
CIRBP-241ENST00000593048 DIRAS1O95057 198 aa13.67□□□□□ -0.22
CIRBP-241ENST00000593048 VENTXO95231 258 aa13.67□□□□□ -0.22
CIRBP-241ENST00000593048 CD55P08174 381 aa13.67□□□□□ -0.22
CIRBP-241ENST00000593048 SBK2P0C263 348 aa13.67□□□□□ -0.22
CIRBP-241ENST00000593048 TNFRSF1AP19438 455 aa13.67□□□□□ -0.22
CIRBP-241ENST00000593048 EPHA1P21709 976 aa13.67□□□□□ -0.22
CIRBP-241ENST00000593048 OMPP47874 163 aa13.67□□□□□ -0.22
CIRBP-241ENST00000593048 DAPP51397 102 aa13.67□□□□□ -0.22
CIRBP-241ENST00000593048 CXCR4P61073 352 aa13.67□□□□□ -0.22
CIRBP-241ENST00000593048 LSM6P62312 80 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms