RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 VCX3BQ9H321 246 aa5.56□□□□□ -1.52
VPS4B-205ENST00000591383 OR51B6Q9H340 312 aa5.56□□□□□ -1.52
VPS4B-205ENST00000591383 ESRP2Q9H6T0 727 aaKnown RBP5.56□□□□□ -1.52
VPS4B-205ENST00000591383 UBTD1Q9HAC8 227 aa5.56□□□□□ -1.52
VPS4B-205ENST00000591383 RNF115Q9Y4L5 304 aa5.56□□□□□ -1.52
VPS4B-205ENST00000591383 FKBP7Q9Y680 259 aa5.56□□□□□ -1.52
VPS4B-205ENST00000591383 CADP27708 2225 aa5.56□□□□□ -1.52
VPS4B-205ENST00000591383 CACNA1DQ01668 2161 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 IGHV1-18A0A0C4DH31 117 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 IQCMA0A1B0GVH7 501 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 TLX2O43763 284 aaPredicted RBP5.55□□□□□ -1.52
VPS4B-205ENST00000591383 SELENOFO60613 162 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 CST2P09228 141 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 ZNF823P16415 610 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 CCNOP22674 350 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 SSTR2P30874 369 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 FMO3P31513 532 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 APLNRP35414 380 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 ARR3P36575 388 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 SERPINF1P36955 418 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 ENTPD1P49961 510 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 AQP4P55087 323 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 PCBD1P61457 104 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 IL5RAQ01344 420 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 GALK2Q01415 458 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 PLP2Q04941 152 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 SNTB2Q13425 540 aaKnown RBP5.55□□□□□ -1.52
VPS4B-205ENST00000591383 ENDOGQ14249 297 aaKnown RBP5.55□□□□□ -1.52
VPS4B-205ENST00000591383 PRR31Q5SQ13 230 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 KRT80Q6KB66 452 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 ZNF774Q6NX45 483 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 CORO6Q6QEF8 472 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 SLC22A25Q6T423 547 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 IZUMO2Q6UXV1 221 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 ZNF704Q6ZNC4 412 aaPredicted RBP5.55□□□□□ -1.52
VPS4B-205ENST00000591383 CFAP77Q6ZQR2 320 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 FOXL2NBQ6ZUU3 175 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 ZNF627Q7L945 461 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 SSX8Q7RTT4 187 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 BCDIN3DQ7Z5W3 292 aaKnown RBP5.55□□□□□ -1.52
VPS4B-205ENST00000591383 DPPA2Q7Z7J5 298 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 GID4Q8IVV7 300 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 CCDC36Q8IYA8 594 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 ACBD4Q8NC06 268 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 SLC30A7Q8NEW0 376 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 IL17RDQ8NFM7 739 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 NUDT10Q8NFP7 164 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 OR2AJ1Q8NGZ0 328 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 FGFBP3Q8TAT2 258 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 TMEM163Q8TC26 289 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 GCDHQ92947 438 aaPredicted RBP5.55□□□□□ -1.52
VPS4B-205ENST00000591383 FBXO17Q96EF6 278 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 NUDT11Q96G61 164 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 RDH12Q96NR8 316 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 INTS14Q96SY0 518 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 CNN2Q99439 309 aaKnown RBP5.55□□□□□ -1.52
VPS4B-205ENST00000591383 PITX2Q99697 317 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 NMNAT2Q9BZQ4 307 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 OR2H1Q9GZK4 316 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 SIAEQ9HAT2 523 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 CDH20Q9HBT6 801 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 MOV10Q9HCE1 1003 aaKnown RBP5.55□□□□□ -1.52
VPS4B-205ENST00000591383 C8orf4Q9NR00 106 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 RASSF1Q9NS23 344 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 PLEK2Q9NYT0 353 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 ZNF224Q9NZL3 707 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 B9D1Q9UPM9 204 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 MOKQ9UQ07 419 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 LHFPL6Q9Y693 200 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 NAV2Q8IVL1 2488 aa5.55□□□□□ -1.52
VPS4B-205ENST00000591383 NOTCH2Q04721 2471 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 IGHV2OR16-5A0A0B4J2B6 119 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 CCDC182A6NF36 153 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 SGCEO43556 437 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 MGRN1O60291 552 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 TOX4O94842 621 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 GLCEO94923 617 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 CLIC3O95833 236 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 PLAUP00749 431 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 CRYAAP02489 173 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 TFP02787 698 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 MMP7P09237 267 aaPredicted RBP5.54□□□□□ -1.52
VPS4B-205ENST00000591383 PSKH1P11801 424 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 CCL2P13500 99 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 CBR1P16152 277 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 SLC2A5P22732 501 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 PTAFRP25105 342 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 CALCRP30988 508 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 CAPGP40121 348 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 GDI2P50395 445 aaKnown RBP5.54□□□□□ -1.52
VPS4B-205ENST00000591383 NUDT6P53370 316 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 RAB32Q13637 225 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 EIF2B1Q14232 305 aaKnown RBP5.54□□□□□ -1.52
VPS4B-205ENST00000591383 HABP2Q14520 560 aaPredicted RBP5.54□□□□□ -1.52
VPS4B-205ENST00000591383 RAB35Q15286 201 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 TBC1D28Q2M2D7 210 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 NRN1LQ496H8 165 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 NCMAPQ5T1S8 102 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 C6orf52Q5T4I8 152 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 FAM27BQ5VT28 67 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms