RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 SMN1Q16637 294 aaKnown RBP16.48■□□□□ 0.23
DDX39A-214ENST00000590556 AGAP6Q5VW22 663 aa16.48■□□□□ 0.23
DDX39A-214ENST00000590556 RGS7BPQ6MZT1 257 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-214ENST00000590556 KRT77Q7Z794 578 aa16.48■□□□□ 0.23
DDX39A-214ENST00000590556 C1orf174Q8IYL3 243 aa16.48■□□□□ 0.23
DDX39A-214ENST00000590556 OR2T27Q8NH04 317 aa16.48■□□□□ 0.23
DDX39A-214ENST00000590556 APOBEC3DQ96AK3 386 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-214ENST00000590556 LGALS12Q96DT0 336 aa16.48■□□□□ 0.23
DDX39A-214ENST00000590556 ZNF799Q96GE5 643 aa16.48■□□□□ 0.23
DDX39A-214ENST00000590556 TBX5Q99593 518 aa16.48■□□□□ 0.23
DDX39A-214ENST00000590556 CCL19Q99731 98 aa16.48■□□□□ 0.23
DDX39A-214ENST00000590556 TTTY10Q9BZA0 68 aa16.48■□□□□ 0.23
DDX39A-214ENST00000590556 SLCO1C1Q9NYB5 712 aa16.48■□□□□ 0.23
DDX39A-214ENST00000590556 ST6GALNAC2Q9UJ37 374 aa16.48■□□□□ 0.23
DDX39A-214ENST00000590556 LAMP3Q9UQV4 416 aa16.48■□□□□ 0.23
DDX39A-214ENST00000590556 PLEKHA6Q9Y2H5 1048 aa16.48■□□□□ 0.23
DDX39A-214ENST00000590556 STARD10Q9Y365 291 aa16.48■□□□□ 0.23
DDX39A-214ENST00000590556 PCDHGB1Q9Y5G3 927 aa16.48■□□□□ 0.23
DDX39A-214ENST00000590556 APOC1P02654 83 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 LCATP04180 440 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 SOD3P08294 240 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 CXCR4P61073 352 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 CDK5R2Q13319 367 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 SNCBQ16143 134 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 SPATA46Q5T0L3 261 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 ZNF322Q6U7Q0 402 aaPredicted RBP16.47■□□□□ 0.23
DDX39A-214ENST00000590556 DRAM2Q6UX65 266 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 LRRN1Q6UXK5 716 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 NAA40Q86UY6 237 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 RFLNBQ8N5W9 214 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 ZNF283Q8N7M2 679 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 MRPL24Q96A35 216 aaKnown RBP16.47■□□□□ 0.23
DDX39A-214ENST00000590556 COG8Q96MW5 612 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 C1QTNF5Q9BXJ0 243 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 MROQ9BYG7 248 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 PLK3Q9H4B4 646 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 FZR1Q9UM11 496 aa16.47■□□□□ 0.23
DDX39A-214ENST00000590556 EXOGQ9Y2C4 368 aaKnown RBP16.47■□□□□ 0.23
DDX39A-214ENST00000590556 A0A1W2PQL4 384 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-214ENST00000590556 B9A039 149 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 J3QW42 95 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 ATE1O95260 518 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 TUBG1P23258 451 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 DNASE1P24855 282 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 ROM1Q03395 351 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 MSMPQ1L6U9 139 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 ZNF718Q3SXZ3 478 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 KLHL22Q53GT1 634 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 DEGS2Q6QHC5 323 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 COLCA1Q6ZS62 124 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 DTX2Q86UW9 622 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 OR5L1Q8NGL2 311 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 SYNPRQ8TBG9 265 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 SLC25A40Q8TBP6 338 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 FBLIM1Q8WUP2 373 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 OR8B4Q96RC9 309 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 TRAF4Q9BUZ4 470 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-214ENST00000590556 OR2J1Q9GZK6 312 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 RASSF4Q9H2L5 321 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 NIPAL2Q9H841 368 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 TUBG2Q9NRH3 451 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 CBLN4Q9NTU7 201 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 DUSP13Q9UII6 198 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 IKZF2Q9UKS7 526 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 LRP12Q9Y561 859 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 NAV2Q8IVL1 2488 aa16.46■□□□□ 0.23
DDX39A-214ENST00000590556 PRR32B1ATL7 298 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 J3QRE1 110 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 PSMD9O00233 223 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 ZNF254O75437 659 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 FADS2O95864 444 aaKnown RBP16.45■□□□□ 0.22
DDX39A-214ENST00000590556 CD8AP01732 235 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 ZNF250P15622 560 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 CD53P19397 219 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 GCH1P30793 250 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 CX3CR1P49238 355 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 SELENOVP59797 346 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 ACTC1P68032 377 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 ACTA1P68133 377 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 EGR3Q06889 387 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 RAB40BQ12829 278 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 EFNB3Q15768 340 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 MST1LQ2TV78 715 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 CDH24Q86UP0 819 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 ZNF679Q8IYX0 411 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 PIGTQ969N2 578 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 MARS2Q96GW9 593 aaKnown RBP16.45■□□□□ 0.22
DDX39A-214ENST00000590556 DOK1Q99704 481 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 SYT3Q9BQG1 590 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 MRPL37Q9BZE1 423 aaKnown RBP16.45■□□□□ 0.22
DDX39A-214ENST00000590556 POFUT1Q9H488 388 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 MRPS18AQ9NVS2 196 aaKnown RBP16.45■□□□□ 0.22
DDX39A-214ENST00000590556 N6AMT1Q9Y5N5 214 aa16.45■□□□□ 0.22
DDX39A-214ENST00000590556 DAPL1A0PJW8 107 aa16.44■□□□□ 0.22
DDX39A-214ENST00000590556 H3BSA7 217 aa16.44■□□□□ 0.22
DDX39A-214ENST00000590556 SLC2A1P11166 492 aa16.44■□□□□ 0.22
DDX39A-214ENST00000590556 MYF6P23409 242 aa16.44■□□□□ 0.22
DDX39A-214ENST00000590556 EVX1P49640 407 aa16.44■□□□□ 0.22
DDX39A-214ENST00000590556 RIDAP52758 137 aaKnown RBP16.44■□□□□ 0.22
DDX39A-214ENST00000590556 KLF3P57682 345 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms