RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 RAP1AP62834 184 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 IFI44LQ53G44 452 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 OR2T2Q6IF00 324 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 C8orf82Q6P1X6 216 aaPredicted RBP6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 LYPD2Q6UXB3 125 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 FAM122BQ7Z309 247 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 RNF148Q8N7C7 305 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 ZNF283Q8N7M2 679 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 ATG16L2Q8NAA4 619 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 PCYOX1LQ8NBM8 494 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 BHLHE23Q8NDY6 225 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 OR52J3Q8NH60 311 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 OR1F12Q8NHA8 337 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 ACOT11Q8WXI4 607 aaPredicted RBP6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 LZICQ8WZA0 190 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 PTP4A1Q93096 173 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 SAMD8Q96LT4 415 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 ZNF570Q96NI8 536 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 OR2V2Q96R30 315 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 RBM4Q9BWF3 364 aaKnown RBP6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 TMEM165Q9HC07 324 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 GCM1Q9NP62 436 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 NRIP3Q9NQ35 241 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 TBCCD1Q9NVR7 557 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 ZNF446Q9NWS9 450 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 PLEK2Q9NYT0 353 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 NDRG4Q9ULP0 352 aaKnown RBP6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 PPP1R3CQ9UQK1 317 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 SIGLEC7Q9Y286 467 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 INSIG2Q9Y5U4 225 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 AUP1Q9Y679 476 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 CAPN7Q9Y6W3 813 aa6.32□□□□□ -1.4
GPATCH8-206ENST00000588554 C5orf63A6NC05 138 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 GMNCA6NCL1 334 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 OR6C6A6NF89 314 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 DNAJC9-AS1A6NH13 148 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 TMEM178BH3BS89 294 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 XKRYO14609 159 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 RGS13O14921 159 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 MLNRO43193 412 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 FOXH1O75593 365 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 NDUFB2O95178 105 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 WNT2P09544 360 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 NR2C1P13056 603 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 ZNF12P17014 697 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 GSTM3P21266 225 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 OMGP23515 440 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 GATA3P23771 443 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 FPR2P25090 351 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 MSX2P35548 267 aaPredicted RBP6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 LIPAP38571 399 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 OMPP47874 163 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 LIMS1P48059 325 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 BTG1P62324 171 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 PAX2Q02962 417 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 SLC3A1Q07837 685 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 SRSF4Q08170 494 aaKnown RBP6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 BAMBIQ13145 260 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 KRR1Q13601 381 aaKnown RBP6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 MAPRE2Q15555 327 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 ARMCX4Q5H9R4 360 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 FGD3Q5JSP0 725 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 FAM205BPQ63HN1 556 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 ARL9Q6T311 187 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 UNQ6126/PRO20091Q6UXV3 157 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 RRM2BQ7LG56 351 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 LINC00346Q8IVM7 164 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 GLB1L2Q8IW92 636 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 RNF113BQ8IZP6 322 aaKnown RBP6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 KLHL36Q8N4N3 616 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 FAM156AQ8NDB6 213 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 RP9Q8TA86 221 aaKnown RBP6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 FNDC8Q8TC99 324 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 JMJD8Q96S16 334 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 DIRC2Q96SL1 478 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 FN3KQ9H479 309 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 DDX28Q9NUL7 540 aaKnown RBP6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 NDUFAF4Q9P032 175 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 RPS6KA6Q9UK32 745 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 NUP50Q9UKX7 468 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 LHFPL6Q9Y693 200 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 V9GYQ6 96 aa6.31□□□□□ -1.4
GPATCH8-206ENST00000588554 TANC2Q9HCD6 1990 aa6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 HTR3EA5X5Y0 456 aa6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 UNC119BA6NIH7 251 aa6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 SLC22A31A6NKX4 558 aa6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 CEACAM18A8MTB9 384 aa6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 F5H0A9 414 aaPredicted RBP6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 KHDRBS3O75525 346 aaKnown RBP6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 PPP1R3DO95685 299 aa6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 TSPAN15O95858 294 aa6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 H1F0P07305 194 aaKnown RBP6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 HKR1P10072 659 aa6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 COX5BP10606 129 aa6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 TNFRSF1AP19438 455 aa6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 PRTN3P24158 256 aa6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 IFNA8P32881 189 aa6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 RPS27P42677 84 aaKnown RBP6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 PSME3P61289 254 aa6.3□□□□□ -1.4
GPATCH8-206ENST00000588554 PAX8Q06710 450 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms