RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 BOD1Q96IK1 185 aa9.85□□□□□ -0.83
VMP1-207ENST00000588131 ZNF75AQ96N20 296 aa9.85□□□□□ -0.83
VMP1-207ENST00000588131 DOK1Q99704 481 aa9.85□□□□□ -0.83
VMP1-207ENST00000588131 COQ7Q99807 217 aa9.85□□□□□ -0.83
VMP1-207ENST00000588131 PDCD1LG2Q9BQ51 273 aa9.85□□□□□ -0.83
VMP1-207ENST00000588131 CHCHD6Q9BRQ6 235 aa9.85□□□□□ -0.83
VMP1-207ENST00000588131 FAM192AQ9GZU8 254 aa9.85□□□□□ -0.83
VMP1-207ENST00000588131 RNF167Q9H6Y7 350 aa9.85□□□□□ -0.83
VMP1-207ENST00000588131 BRD7Q9NPI1 651 aa9.85□□□□□ -0.83
VMP1-207ENST00000588131 SLC17A5Q9NRA2 495 aa9.85□□□□□ -0.83
VMP1-207ENST00000588131 RSL24D1Q9UHA3 163 aaKnown RBP9.85□□□□□ -0.83
VMP1-207ENST00000588131 STUB1Q9UNE7 303 aa9.85□□□□□ -0.83
VMP1-207ENST00000588131 GTF2A1LQ9UNN4 478 aa9.85□□□□□ -0.83
VMP1-207ENST00000588131 INTS1Q8N201 2190 aaKnown RBP9.85□□□□□ -0.83
VMP1-207ENST00000588131 ARPC4-TTLL3A0A0A6YYG9 625 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 LOC100506127A0A0U1RQW1 187 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 F5H5K5 113 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 H3BMQ9 156 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 AIREO43918 545 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 AGFG2O95081 481 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 ZFPL1O95159 310 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 CD1AP06126 327 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 APEX1P27695 318 aaKnown RBP9.84□□□□□ -0.83
VMP1-207ENST00000588131 CCKARP32238 428 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 ARR3P36575 388 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 MMP16P51512 607 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 CCR9P51686 369 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 TMBIM6P55061 237 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 UBE2NP61088 152 aaKnown RBP9.84□□□□□ -0.83
VMP1-207ENST00000588131 NCS1P62166 190 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 RPS11P62280 158 aaKnown RBP eCLIP9.84□□□□□ -0.83
VMP1-207ENST00000588131 FABP5Q01469 135 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 FAM27E3Q08E93 113 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 GSG1Q2KHT4 349 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 ODF4Q2M2E3 257 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 ZNF829Q3KNS6 432 aaPredicted RBP9.84□□□□□ -0.83
VMP1-207ENST00000588131 PRSS45Q7RTY3 260 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 DPPA2Q7Z7J5 298 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 MYPOPQ86VE0 399 aaPredicted RBP9.84□□□□□ -0.83
VMP1-207ENST00000588131 RDH10Q8IZV5 341 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 GALNT11Q8NCW6 608 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 ZNF420Q8TAQ5 688 aaPredicted RBP9.84□□□□□ -0.83
VMP1-207ENST00000588131 C12orf43Q96C57 262 aaKnown RBP9.84□□□□□ -0.83
VMP1-207ENST00000588131 CCDC120Q96HB5 630 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 CENPOQ9BU64 300 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 PBOV1Q9GZY1 135 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 NIPAL2Q9H841 368 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 OR52A1Q9UKL2 312 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 N6AMT1Q9Y5N5 214 aa9.84□□□□□ -0.83
VMP1-207ENST00000588131 LOC100509620A0A075B734 347 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 OR5H1A6NKK0 313 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 B8ZZF3 427 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 H3BSH0 61 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 M0R135 149 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 GABRPO00591 440 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 GPRIN2O60269 458 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 C1QL1O75973 258 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 ATE1O95260 518 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 TTRP02766 147 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 ANXA2P07355 339 aaKnown RBP9.83□□□□□ -0.84
VMP1-207ENST00000588131 CELA3BP08861 270 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 ACSM4P0C7M7 580 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 CCL2P13500 99 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 CD53P19397 219 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 PSMB1P20618 241 aaKnown RBP9.83□□□□□ -0.84
VMP1-207ENST00000588131 IL32P24001 234 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 PSMA1P25786 263 aaKnown RBP9.83□□□□□ -0.84
VMP1-207ENST00000588131 HOXC12P31275 282 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 VBP1P61758 197 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 ECH1Q13011 328 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 BCL2L15Q5TBC7 163 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 CD200R1LQ6Q8B3 271 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 TMEM91Q6ZNR0 172 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 FAM57BQ71RH2 274 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 CCDC36Q8IYA8 594 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 ZNF843Q8N446 348 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 C17orf78Q8N4C9 275 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 ZNF676Q8N7Q3 588 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 OR8B12Q8NGG6 310 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 OR10AC1Q8NH08 325 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 OR5AK2Q8NH90 309 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 ABHD4Q8TB40 342 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 PRR7Q8TB68 274 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 RAB2BQ8WUD1 216 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 SPTSSAQ969W0 71 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 S100PBPQ96BU1 408 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 DGCR14Q96DF8 476 aaKnown RBP9.83□□□□□ -0.84
VMP1-207ENST00000588131 ZNF799Q96GE5 643 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 HDHD5Q9BXW7 423 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 EXOSC4Q9NPD3 245 aaKnown RBP9.83□□□□□ -0.84
VMP1-207ENST00000588131 ZNF319Q9P2F9 582 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 NUFIP1Q9UHK0 495 aaKnown RBP9.83□□□□□ -0.84
VMP1-207ENST00000588131 ZNF281Q9Y2X9 895 aa9.83□□□□□ -0.84
VMP1-207ENST00000588131 TRDV1A0A1B0GX56 115 aa9.82□□□□□ -0.84
VMP1-207ENST00000588131 TMEM212A6NML5 194 aa9.82□□□□□ -0.84
VMP1-207ENST00000588131 FAM90A27PA6NNH2 459 aa9.82□□□□□ -0.84
VMP1-207ENST00000588131 ZNF701M0R085 212 aaPredicted RBP9.82□□□□□ -0.84
VMP1-207ENST00000588131 P2RY10O00398 339 aa9.82□□□□□ -0.84
VMP1-207ENST00000588131 NOL3O60936 208 aaKnown RBP9.82□□□□□ -0.84
VMP1-207ENST00000588131 SC5DO75845 299 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms