RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 NIPBLQ6KC79 2804 aaeCLIP12.63□□□□□ -0.39
ATG4D-207ENST00000587256 SONP18583 2426 aaKnown RBP12.62□□□□□ -0.39
ATG4D-207ENST00000587256 IGHV1-69-2A0A0G2JMI3 117 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 LRP5LA4QPB2 252 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 M0R135 149 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 EBAG9O00559 213 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 PPIHO43447 177 aaKnown RBP12.62□□□□□ -0.39
ATG4D-207ENST00000587256 ACSM4P0C7M7 580 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 IGHV4-31P0DP07 118 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 PSKH1P11801 424 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 HOXB4P17483 251 aaPredicted RBP12.62□□□□□ -0.39
ATG4D-207ENST00000587256 COL8A2P25067 703 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 TPTEP56180 551 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 HLXQ14774 488 aaPredicted RBP12.62□□□□□ -0.39
ATG4D-207ENST00000587256 TAF13Q15543 124 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 TRIP10Q15642 601 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 C6orf52Q5T4I8 152 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 CYB5R2Q6BCY4 276 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 ACSM5Q6NUN0 579 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 PLBD1Q6P4A8 553 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 FAHD1Q6P587 224 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 USP51Q70EK9 711 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 ERI1Q8IV48 349 aaKnown RBP12.62□□□□□ -0.39
ATG4D-207ENST00000587256 OR6N2Q8NGY6 317 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 ELMOD3Q96FG2 381 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 ZNF799Q96GE5 643 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 DIRC2Q96SL1 478 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 INTS14Q96SY0 518 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 EGLN1Q9GZT9 426 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 OR51V1Q9H2C8 321 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 NARFLQ9H6Q4 476 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 SLC25A19Q9HC21 320 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 KRT84Q9NSB2 600 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 ZDHHC8Q9ULC8 765 aa12.62□□□□□ -0.39
ATG4D-207ENST00000587256 CHD3Q12873 2000 aaKnown RBP12.62□□□□□ -0.39
ATG4D-207ENST00000587256 A8MV72 311 aaPredicted RBP12.61□□□□□ -0.39
ATG4D-207ENST00000587256 G3V2T6 193 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 ZNF593O00488 134 aaPredicted RBP12.61□□□□□ -0.39
ATG4D-207ENST00000587256 SURF4O15260 269 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 RP2O75695 350 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 GLCEO94923 617 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 LCATP04180 440 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 RAC2P15153 192 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 KITLGP21583 273 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 TNFSF4P23510 183 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 GSTT1P30711 240 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 RPS7P62081 194 aaKnown RBP12.61□□□□□ -0.39
ATG4D-207ENST00000587256 TNFAIP6P98066 277 aaPredicted RBP12.61□□□□□ -0.39
ATG4D-207ENST00000587256 MALLQ13021 153 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 KRTAP27-1Q3LI81 207 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 KLHL12Q53G59 568 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 LINC01590Q5TEZ4 76 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 TMEM236Q5W0B7 351 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 FBXW12Q6X9E4 464 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 SPATC1Q76KD6 591 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 AMIGO2Q86SJ2 522 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 ZDHHC13Q8IUH4 622 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 OR5AS1Q8N127 324 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 PARP8Q8N3A8 854 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 OR10S1Q8NGN2 331 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 LRTOMTQ8WZ04 291 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 PTP4A1Q93096 173 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 HAVCR1Q96D42 359 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 SLAMF6Q96DU3 332 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 ZMYND19Q96E35 227 aaPredicted RBP12.61□□□□□ -0.39
ATG4D-207ENST00000587256 DUS3LQ96G46 650 aaKnown RBP12.61□□□□□ -0.39
ATG4D-207ENST00000587256 C1QTNF5Q9BXJ0 243 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 PRRG3Q9BZD7 231 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 CENPMQ9NSP4 180 aa12.61□□□□□ -0.39
ATG4D-207ENST00000587256 DDX28Q9NUL7 540 aaKnown RBP12.61□□□□□ -0.39
ATG4D-207ENST00000587256 CLDN25C9JDP6 229 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 ZNF878C9JN71 531 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 PRODHO43272 600 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 LILRA1O75019 489 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 ADH4P08319 380 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 TACSTD2P09758 323 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 CRYBB2P43320 205 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 DAPP51397 102 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 CRISP1P54107 249 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 TMEM33P57088 247 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 CDK5Q00535 292 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 EIF2B1Q14232 305 aaKnown RBP12.6□□□□□ -0.39
ATG4D-207ENST00000587256 SNAPC1Q16533 368 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 HFEQ30201 348 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 OR2T2Q6IF00 324 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 CXXC5Q7LFL8 322 aaKnown RBP12.6□□□□□ -0.39
ATG4D-207ENST00000587256 OR2Z1Q8NG97 314 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 GABARAPL1Q9H0R8 117 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 SEMA6AQ9H2E6 1030 aa12.6□□□□□ -0.39
ATG4D-207ENST00000587256 LOC100289279A0A1B0GTE1 492 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 MITFO75030 526 aaPredicted RBP12.59□□□□□ -0.39
ATG4D-207ENST00000587256 HSD11B1P28845 292 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 PRKXP51817 358 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 ESRRGP62508 458 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 KPNB1Q14974 876 aaKnown RBP12.59□□□□□ -0.39
ATG4D-207ENST00000587256 PCK2Q16822 640 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 RSPO1Q2MKA7 263 aaPredicted RBP12.59□□□□□ -0.39
ATG4D-207ENST00000587256 TEX30Q5JUR7 227 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 AVPI1Q5T686 147 aa12.59□□□□□ -0.39
ATG4D-207ENST00000587256 FAM166AQ6J272 317 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms