RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 RNF133Q8WVZ7 376 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 NKD1Q969G9 470 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 MRGPRFQ96AM1 343 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ARL5BQ96KC2 179 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 COMMD9Q9P000 198 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 DUX4Q9UBX2 424 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 NPIPA1Q9UND3 350 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 TRIOO75962 3097 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ARID1BQ8NFD5 2236 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 KANTRA0A1W2PQU2 76 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 NPIPB13A6NJU9 1138 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 NPIPB4C9JG80 1138 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 LMO7DNF2Z398 122 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 H2BFMP0C1H6 154 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 CD27P26842 260 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 BDKRB2P30411 391 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ARL4DP49703 201 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 MOB3CQ70IA8 216 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 H1FNTQ75WM6 255 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 SYT13Q7L8C5 426 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 MISPQ8IVT2 679 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 SMRP1Q8NCR6 262 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 FGGYQ96C11 551 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 NPAS1Q99742 590 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 PDCD10Q9BUL8 212 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 TPSD1Q9BZJ3 242 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 TMEM185BQ9H7F4 350 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 BARX1Q9HBU1 254 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 SMAD9O15198 467 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 BCL2L11O43521 198 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 IL2RAP01589 272 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 HSD11B1P28845 292 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 QRFPP83859 136 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 UNC119Q13432 240 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 TAF13Q15543 124 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 OR7A5Q15622 319 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 RAB30Q15771 203 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 TRAPPC6BQ86SZ2 158 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ZDHHC22Q8N966 263 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 MFSD8Q8NHS3 518 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 PPP1R1CQ8WVI7 109 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ST8SIA1Q92185 356 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 CST11Q9H112 138 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 CENPMQ9NSP4 180 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 FAM206AQ9NX38 181 aa12.66□□□□□ -0.38
CDK5RAP3-237ENST00000585163 RNF222A6NCQ9 220 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 C2CD4DB7Z1M9 353 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 CCSO14618 274 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 S100A6P06703 90 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 LIPCP11150 499 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 PPP1R1AQ13522 171 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 LRRC37A5PQ49AS3 106 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 FAM74A1Q5RGS3 127 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 LANCL3Q6ZV70 420 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 GVQW1Q8N7I0 195 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 OR52N4Q8NGI2 321 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 MITD1Q8WV92 249 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 FAM46BQ96A09 425 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 CMBLQ96DG6 245 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 SEC22AQ96IW7 307 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 VRK1Q99986 396 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 CYB5R1Q9UHQ9 305 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 BRWD1Q9NSI6 2320 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ANKUB1A6NFN9 424 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ZNF217O75362 1048 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 TTRP02766 147 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 FOLR1P15328 257 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 TSPAN7P41732 249 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 LUMP51884 338 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 OR1D5P58170 312 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 HSF1Q00613 529 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 POU3F1Q03052 451 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 C1orf189Q5VU69 101 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ACOT7LQ6ZUV0 252 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 CARFQ8N187 725 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 D2HGDHQ8N465 521 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 OR52H1Q8NGJ2 320 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 PHYHIPLQ96FC7 376 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 MED29Q9NX70 200 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 SUSD2Q9UGT4 822 aa12.65□□□□□ -0.38
CDK5RAP3-237ENST00000585163 LAMA1P25391 3075 aa12.65□□□□□ -0.39
CDK5RAP3-237ENST00000585163 A0A1B0GX78 115 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 C9orf170A2RU37 121 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 EIF1AYO14602 144 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 STK17BO94768 372 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 BPNT1O95861 308 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 STARP49675 285 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ATP1B3P54709 279 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 RNF4P78317 190 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 CFHR1Q03591 330 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SLC22A6Q4U2R8 563 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 OR52W1Q6IF63 320 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 FAHD2BQ6P2I3 314 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 FAM122CQ6P4D5 195 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SLC22A24Q8N4F4 322 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 TSTD1Q8NFU3 115 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ADAT3Q96EY9 351 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms