RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 ZNF665Q9H7R5 613 aa10.51□□□□□ -0.73
SS18-225ENST00000585121 LPAR2Q9HBW0 351 aa10.51□□□□□ -0.73
SS18-225ENST00000585121 HIF1ANQ9NWT6 349 aa10.51□□□□□ -0.73
SS18-225ENST00000585121 PTTG3PQ9NZH4 202 aa10.51□□□□□ -0.73
SS18-225ENST00000585121 WIPI2Q9Y4P8 454 aa10.51□□□□□ -0.73
SS18-225ENST00000585121 TRAV20A0A0B4J274 112 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 F5H5K5 113 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 CST1P01037 141 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 TPTEP56180 551 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 LMO4P61968 165 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 PPP1R8Q12972 351 aaKnown RBP10.5□□□□□ -0.73
SS18-225ENST00000585121 MALLQ13021 153 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 SCGB2A2Q13296 93 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 TMEM255AQ5JRV8 349 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 ZNF770Q6IQ21 691 aaPredicted RBP10.5□□□□□ -0.73
SS18-225ENST00000585121 SLC18B1Q6NT16 456 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 FBXW12Q6X9E4 464 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 LINC00346Q8IVM7 164 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 TEX29Q8N6K0 151 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 CYB561A3Q8NBI2 242 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 SPTSSAQ969W0 71 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 CLPTM1LQ96KA5 538 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 ZNF582Q96NG8 517 aaPredicted RBP10.5□□□□□ -0.73
SS18-225ENST00000585121 ATF6BQ99941 703 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 GAL3ST1Q99999 423 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 HCAR1Q9BXC0 346 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 RASSF4Q9H2L5 321 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 YY1AP1Q9H869 796 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 IL19Q9UHD0 177 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 CYB5R1Q9UHQ9 305 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 CACNG2Q9Y698 323 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 MXRA5Q9NR99 2828 aa10.5□□□□□ -0.73
SS18-225ENST00000585121 AQP12BA6NM10 295 aa10.49□□□□□ -0.73
SS18-225ENST00000585121 FAM157AC9JC47 383 aa10.49□□□□□ -0.73
SS18-225ENST00000585121 PHF1O43189 567 aaPredicted RBP10.49□□□□□ -0.73
SS18-225ENST00000585121 CIB2O75838 187 aa10.49□□□□□ -0.73
SS18-225ENST00000585121 PYCR1P32322 319 aa10.49□□□□□ -0.73
SS18-225ENST00000585121 OR2T2Q6IF00 324 aa10.49□□□□□ -0.73
SS18-225ENST00000585121 SHQ1Q6PI26 577 aaKnown RBP10.49□□□□□ -0.73
SS18-225ENST00000585121 AQP12AQ8IXF9 295 aa10.49□□□□□ -0.73
SS18-225ENST00000585121 OR5AS1Q8N127 324 aa10.49□□□□□ -0.73
SS18-225ENST00000585121 LNX2Q8N448 690 aa10.49□□□□□ -0.73
SS18-225ENST00000585121 ATG16L2Q8NAA4 619 aa10.49□□□□□ -0.73
SS18-225ENST00000585121 SLC37A3Q8NCC5 494 aa10.49□□□□□ -0.73
SS18-225ENST00000585121 OR10G2Q8NGC3 310 aa10.49□□□□□ -0.73
SS18-225ENST00000585121 OR13G1Q8NGZ3 307 aa10.49□□□□□ -0.73
SS18-225ENST00000585121 SPATA3Q8NHX4 192 aa10.49□□□□□ -0.73
SS18-225ENST00000585121 GIPC3Q8TF64 312 aa10.49□□□□□ -0.73
SS18-225ENST00000585121 CHID1Q9BWS9 393 aa10.49□□□□□ -0.73
SS18-225ENST00000585121 PLA2G12AQ9BZM1 189 aa10.49□□□□□ -0.73
SS18-225ENST00000585121 FBN1P35555 2871 aaKnown RBP10.49□□□□□ -0.73
SS18-225ENST00000585121 DHRS12A0PJE2 317 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 RIIAD1A6NNX1 92 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 IFNL4K9M1U5 179 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 ACOT8O14734 319 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 SOX14O95416 240 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 LCATP04180 440 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 FMO3P31513 532 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 GGT2P36268 569 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 BLVRAP53004 296 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 HLXQ14774 488 aaPredicted RBP10.48□□□□□ -0.73
SS18-225ENST00000585121 TAF13Q15543 124 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 LIPNQ5VXI9 398 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 FAHD2BQ6P2I3 314 aaPredicted RBP10.48□□□□□ -0.73
SS18-225ENST00000585121 CFAP77Q6ZQR2 320 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 C10orf67Q8IYJ2 551 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 OR8G5Q8NG78 346 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 OR8D4Q8NGM9 314 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 TEX47Q8TBZ9 253 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 ST7LQ8TDW4 575 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 FAHD2AQ96GK7 314 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 C1QTNF5Q9BXJ0 243 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 ZNF556Q9HAH1 456 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 TMEM106BQ9NUM4 274 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 ARMC1Q9NVT9 282 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 VNN3Q9NY84 501 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 UBAP1Q9NZ09 502 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 PCDHB10Q9UN67 800 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 PPP1R3CQ9UQK1 317 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 NPTNQ9Y639 398 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 CUBNO60494 3623 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 TVP23AA6NH52 213 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 H3BN98 237 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 E2F6O75461 281 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 IGHV2-5P01817 119 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 ACSM4P0C7M7 580 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 ZNF3P17036 446 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 SLC6A9P48067 706 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 SRP9P49458 86 aaKnown RBP10.48□□□□□ -0.73
SS18-225ENST00000585121 FLOT2Q14254 428 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 CD300LDQ6UXZ3 194 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 Q6ZR03 302 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 SPATA24Q86W54 205 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 ADGRG5Q8IZF4 528 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 SPICQ8N5J4 248 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 OR51L1Q8NGJ5 315 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 OR9Q1Q8NGQ5 310 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 CANT1Q8WVQ1 401 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 ITLN1Q8WWA0 313 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 OR2V2Q96R30 315 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms