RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CRABP1P29762 137 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 DAP3P51398 398 aaKnown RBP9.12□□□□□ -0.95
RFFL-212ENST00000584655 BAMBIQ13145 260 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 FAM205BPQ63HN1 556 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 GPR139Q6DWJ6 353 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 CDH24Q86UP0 819 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 CXorf67Q86X51 503 aaPredicted RBP9.12□□□□□ -0.95
RFFL-212ENST00000584655 OR8H3Q8N146 312 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 FAM181AQ8N9Y4 354 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 FGF11Q92914 225 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 HGDQ93099 445 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 INTS12Q96CB8 462 aaKnown RBP9.12□□□□□ -0.95
RFFL-212ENST00000584655 ITPKCQ96DU7 683 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 BCL7BQ9BQE9 202 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 ESRP2Q9H6T0 727 aaKnown RBP9.12□□□□□ -0.95
RFFL-212ENST00000584655 CPNE5Q9HCH3 593 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 ADAM30Q9UKF2 790 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 NTN3O00634 580 aaPredicted RBP9.11□□□□□ -0.95
RFFL-212ENST00000584655 ZIC3O60481 467 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 TMEM225BP0DP42 221 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 ARSBP15848 533 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 CX3CR1P49238 355 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 SOX8P57073 446 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 MOGAT2Q3SYC2 334 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 ZNF679Q8IYX0 411 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 ELMOD2Q8IZ81 293 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 ZBTB44Q8NCP5 570 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 OR52N5Q8NH56 324 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 ADAT3Q96EY9 351 aaPredicted RBP9.11□□□□□ -0.95
RFFL-212ENST00000584655 S100A16Q96FQ6 103 aaKnown RBP9.11□□□□□ -0.95
RFFL-212ENST00000584655 C1orf198Q9H425 327 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 OR5V1Q9UGF6 321 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 IFITM5A6NNB3 132 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 PLPP2O43688 288 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 LYZL6O75951 148 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 GNB3P16520 340 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 HOXD11P31277 338 aaPredicted RBP9.11□□□□□ -0.95
RFFL-212ENST00000584655 PTGDSP41222 190 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 ARPC4P59998 168 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 RPS11P62280 158 aaKnown RBP eCLIP9.11□□□□□ -0.95
RFFL-212ENST00000584655 ZNF181Q2M3W8 571 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 C2orf76Q3KRA6 126 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 BEX5Q5H9J7 111 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 TMEM255AQ5JRV8 349 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 ZNF782Q6ZMW2 699 aaPredicted RBP9.11□□□□□ -0.95
RFFL-212ENST00000584655 SLC16A14Q7RTX9 510 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 GALNT16Q8N428 558 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 NUBPLQ8TB37 319 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 SNAPC3Q92966 411 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 IMMP1LQ96LU5 166 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 ZC4H2Q9NQZ6 224 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 TREM2Q9NZC2 230 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 ITGB1BP2Q9UKP3 347 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 ALG5Q9Y673 324 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 ANKHD1Q8IWZ3 2542 aaKnown RBP9.11□□□□□ -0.95
RFFL-212ENST00000584655 TRAV39A0A0B4J263 110 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 CCDC163A0A0D9SF12 145 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 CIB4A0PJX0 185 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 E9PLN8 166 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 KCNAB3O43448 404 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 AKR7A2O43488 359 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 MRPL33O75394 65 aaKnown RBP9.11□□□□□ -0.95
RFFL-212ENST00000584655 LIFP15018 202 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 EIF2S3P41091 472 aaKnown RBP9.11□□□□□ -0.95
RFFL-212ENST00000584655 GPR50Q13585 617 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 FDCSPQ8NFU4 85 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 LILRB4Q8NHJ6 448 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 FGFBP3Q8TAT2 258 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 ELP5Q8TE02 316 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 UPRTQ96BW1 309 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 MRPL48Q96GC5 212 aaKnown RBP9.11□□□□□ -0.95
RFFL-212ENST00000584655 C4orf45Q96LM5 186 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 PSD2Q9BQI7 771 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 ZNF552Q9H707 407 aaPredicted RBP9.11□□□□□ -0.95
RFFL-212ENST00000584655 NOSIPQ9Y314 301 aaKnown RBP9.11□□□□□ -0.95
RFFL-212ENST00000584655 PCDHGA1Q9Y5H4 931 aa9.11□□□□□ -0.95
RFFL-212ENST00000584655 OR4C45A6NMZ5 311 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 RAD51DO75771 328 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 HLXQ14774 488 aaPredicted RBP9.1□□□□□ -0.95
RFFL-212ENST00000584655 LYPD8Q6UX82 237 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 ZNF441Q8N8Z8 693 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 ASB10Q8WXI3 467 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 WDR89Q96FK6 387 aaPredicted RBP9.1□□□□□ -0.95
RFFL-212ENST00000584655 OR8B4Q96RC9 309 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 MNTQ99583 582 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 NICN1Q9BSH3 213 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 B3GAT1Q9P2W7 334 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 TDGF1P13385 188 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 TAS2R43P59537 309 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 RPS4XP62701 263 aaKnown RBP9.1□□□□□ -0.95
RFFL-212ENST00000584655 EXT1Q16394 746 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 CCDC58Q4VC31 144 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 C4orf46Q504U0 113 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 MZT2BQ6NZ67 158 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 DNM1P34Q6PK57 102 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 ZNF485Q8NCK3 441 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 IL17RDQ8NFM7 739 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 GPHA2Q96T91 129 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 ZNF581Q9P0T4 197 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 HHLA2Q9UM44 414 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms