RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 A0A1W2PQ72 361 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 FEZF1A0PJY2 475 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 ANKDD1BA6NHY2 528 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 ZSCAN5BA6NJL1 495 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 C12orf71A8MTZ7 269 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 C5orf58C9J3I9 102 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 M0R129 80 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 HMGN4O00479 90 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 TFECO14948 347 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 CASC3O15234 703 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 FABP7O15540 132 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 ADAM12O43184 909 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 OR10H3O60404 316 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 HPGDSO60760 199 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 CSF2P04141 144 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 HMGN1P05114 100 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 KLK1P06870 262 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 IGFBP1P08833 259 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 PSKH1P11801 424 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 NPR2P20594 1047 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 PRKACBP22694 351 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 LHCGRP22888 699 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 CALCRP30988 508 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 OR1D2P34982 312 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 CHRNA7P36544 502 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 IFNGR2P38484 337 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 OPRD1P41143 372 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 MAGEB1P43366 347 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 TGM4P49221 684 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 PRLHRP49683 370 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 ACTR1AP61163 376 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 RPS25P62851 125 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 SLC7A9P82251 487 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 HOXC5Q00444 222 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 MXD1Q05195 221 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 CNTN1Q12860 1018 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 TSPAN31Q12999 210 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 CDH18Q13634 790 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 GNA13Q14344 377 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 GPR176Q14439 515 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 GANABQ14697 944 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 GPNMBQ14956 572 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 P2RY14Q15391 338 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 TRAM1Q15629 374 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 CLLU1Q5K131 121 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 EOGTQ5NDL2 527 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 HENMT1Q5T8I9 393 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 TRIQKQ629K1 86 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 PYHIN1Q6K0P9 492 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 SLC27A4Q6P1M0 643 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 CNIH2Q6PI25 160 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 FIP1L1Q6UN15 594 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 PRSS55Q6UWB4 352 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 TMIGD1Q6UXZ0 262 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 TMEM91Q6ZNR0 172 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 COMMD6Q7Z4G1 85 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 OAFQ86UD1 273 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 LRRC28Q86X40 367 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 GRAMD2AQ8IUY3 354 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 IQCF2Q8IXL9 164 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 C11orf53Q8IXP5 236 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 LRRC17Q8N6Y2 441 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 SLC37A3Q8NCC5 494 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 ZNF680Q8NEM1 530 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 ATP6V1C2Q8NEY4 427 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 PRSS33Q8NF86 280 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 TMEM185AQ8NFB2 350 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 OR4D11Q8NGI4 311 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 OR9A1PQ8NGU1 263 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 WFDC5Q8TCV5 224 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 CXorf40AQ8TE69 158 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 ZNF431Q8TF32 576 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 SMPDL3AQ92484 453 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 HGDQ93099 445 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 UCN3Q969E3 161 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 NEIL2Q969S2 332 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 CIDECQ96AQ7 238 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 TMEM159Q96B96 161 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 MRPL38Q96DV4 380 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 C14orf79Q96F83 325 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 FOPNLQ96NB1 174 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 LMF2Q9BU23 707 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 ZSCAN5AQ9BUG6 496 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 PINK1Q9BXM7 581 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 PRRG4Q9BZD6 226 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 TM6SF2Q9BZW4 377 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 ACTR6Q9GZN1 396 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 VN1R1Q9GZP7 353 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 SPNS1Q9H2V7 528 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 PIGUQ9H490 435 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 RAB9BQ9NP90 201 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 MAN2C1Q9NTJ4 1040 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 GLTPQ9NZD2 209 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 DNAJC27Q9NZQ0 273 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 EMC3Q9P0I2 261 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 COPZ2Q9P299 210 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 COMMD3Q9UBI1 195 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 PPP1R3CQ9UQK1 317 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 PLEKHA6Q9Y2H5 1048 aa3.31□□□□□ -1.88
SMCHD1-208ENST00000583344 NUBP2Q9Y5Y2 271 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms