RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 FN3KQ9H479 309 aa9.74□□□□□ -0.85
CDK5RAP3-223ENST00000582114 ANKRD19PQ9H560 264 aa9.74□□□□□ -0.85
CDK5RAP3-223ENST00000582114 UNKLQ9H9P5 680 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-223ENST00000582114 EFCAB1Q9HAE3 211 aa9.74□□□□□ -0.85
CDK5RAP3-223ENST00000582114 TMEM165Q9HC07 324 aa9.74□□□□□ -0.85
CDK5RAP3-223ENST00000582114 SRA1Q9HD15 236 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-223ENST00000582114 LRCH1Q9Y2L9 728 aa9.74□□□□□ -0.85
CDK5RAP3-223ENST00000582114 TRAV40A0A0B4J280 105 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 F5H5K5 113 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 PMELP40967 661 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 SRP9P49458 86 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 PAX8Q06710 450 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 SLC9A3R2Q15599 337 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 RSPO1Q2MKA7 263 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 TUSC1Q2TAM9 212 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 BTNL3Q6UXE8 466 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 CFAP77Q6ZQR2 320 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 NAA40Q86UY6 237 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 RNF148Q8N7C7 305 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 GJC3Q8NFK1 279 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 OR4K13Q8NH42 304 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 NMNAT3Q96T66 252 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 PITX2Q99697 317 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 COQ7Q99807 217 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 SLC30A2Q9BRI3 323 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 HDHD2Q9H0R4 259 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 TNFRSF19Q9NS68 423 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 UFSP2Q9NUQ7 469 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 B9D1Q9UPM9 204 aa9.73□□□□□ -0.85
CDK5RAP3-223ENST00000582114 IGLV1-36A0A0B4J1U3 117 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 IGHV2-70DA0A0C4DH43 119 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 IQCF6A8MYZ5 107 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 TXNDC12O95881 172 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 HLA-DQA2P01906 255 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 HIST1H1CP16403 213 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 RHCEP18577 417 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 OMGP23515 440 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 FPR3P25089 353 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 CRABP1P29762 137 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 MDH1P40925 334 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 PSME3P61289 254 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 SPIBQ01892 262 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 PAX2Q02962 417 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 KRT72Q14CN4 511 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 KCNMB1Q16558 191 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 PRAMEF6Q5VXH4 476 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 GLYATQ6IB77 296 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 DNM1P34Q6PK57 102 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 SMARCD3Q6STE5 483 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 SHISA2Q6UWI4 295 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 LYPD2Q6UXB3 125 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 BRD3OSQ6XYD6 125 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 OR6V1Q8N148 313 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 SDR9C7Q8NEX9 313 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 OR8B3Q8NGG8 313 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 SLC25A28Q96A46 364 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 NEIL1Q96FI4 390 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 C7orf34Q96L11 122 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 OR8B2Q96RD0 313 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 HCAR1Q9BXC0 346 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 KRCC1Q9NPI7 259 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 RPRD1BQ9NQG5 326 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 TMEM100Q9NV29 134 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 ZNF446Q9NWS9 450 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 ADA2Q9NZK5 511 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 MIOXQ9UGB7 285 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 ATPIF1Q9UII2 106 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 TRRAPQ9Y4A5 3859 aa9.72□□□□□ -0.85
CDK5RAP3-223ENST00000582114 LRRC30A6NM36 301 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 J3QW42 95 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 IFNL4K9M1U5 179 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 CCDC22O60826 627 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 RENP00797 406 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 LCATP04180 440 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 RNASE1P07998 156 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 ACSM4P0C7M7 580 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 RPS27P42677 84 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 PITPNBP48739 271 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 HIST1H3AP68431 136 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 COX10Q12887 443 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 GK2Q14410 553 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 ZNF404Q494X3 552 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 PRR31Q5SQ13 230 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 SLC35F1Q5T1Q4 408 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 HIST2H3PS2Q5TEC6 136 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 SLC18B1Q6NT16 456 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 LRRN1Q6UXK5 716 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 HIST2H3AQ71DI3 136 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 SPATC1Q76KD6 591 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 NLRC3Q7RTR2 1065 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 BOLLQ8N9W6 283 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 SLC26A10Q8NG04 563 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 RAB40AQ8WXH6 277 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 SLCO4A1Q96BD0 722 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 PLEKHA8Q96JA3 519 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 NUDT16L1Q9BRJ7 211 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 FUZQ9BT04 418 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 IFT27Q9BW83 186 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 CDADC1Q9BWV3 514 aa9.71□□□□□ -0.86
CDK5RAP3-223ENST00000582114 NSRP1Q9H0G5 558 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms