RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 TVP23BQ9NYZ1 205 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 TREM2Q9NZC2 230 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 H2AFY2Q9P0M6 372 aaPredicted RBP5.6□□□□□ -1.51
TRAF4-213ENST00000578917 CGGBP1Q9UFW8 167 aaPredicted RBP5.6□□□□□ -1.51
TRAF4-213ENST00000578917 CYB5R1Q9UHQ9 305 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 ATPIF1Q9UII2 106 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 ABCA2Q9BZC7 2435 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 RTTNQ86VV8 2226 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 IGHV4-61A0A0C4DH41 118 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 ISPDA4D126 451 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 LRP5LA4QPB2 252 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 CLDN25C9JDP6 229 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 M0R135 149 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 IGHV1-46P01743 117 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 APOC1P02654 83 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 CLUP10909 449 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 RAC2P15153 192 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 SELEP16581 610 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 TNFRSF1AP19438 455 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 GIFP27352 417 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 HSD11B1P28845 292 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 RPS27P42677 84 aaKnown RBP5.59□□□□□ -1.51
TRAF4-213ENST00000578917 CRYBB2P43320 205 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 ENTPD1P49961 510 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 PRKXP51817 358 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 SLC25A1P53007 311 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 CRISP1P54107 249 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 RAD23AP54725 363 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 CDH15P55291 814 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 HIST1H3AP68431 136 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 MRPS11P82912 194 aaKnown RBP5.59□□□□□ -1.51
TRAF4-213ENST00000578917 SLC3A1Q07837 685 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 CCNIQ14094 377 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 EIF2B1Q14232 305 aaKnown RBP5.59□□□□□ -1.51
TRAF4-213ENST00000578917 ATP6AP1Q15904 470 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 FAM209AQ5JX71 171 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 HIST2H3PS2Q5TEC6 136 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 TMEM236Q5W0B7 351 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 OR2T2Q6IF00 324 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 FAM166AQ6J272 317 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 ACSM5Q6NUN0 579 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 CFAP77Q6ZQR2 320 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 HIST2H3AQ71DI3 136 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 PGAP1Q75T13 922 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 ZNF771Q7L3S4 317 aaPredicted RBP5.59□□□□□ -1.51
TRAF4-213ENST00000578917 SHFQ7M4L6 423 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 MRPL21Q7Z2W9 205 aaKnown RBP5.59□□□□□ -1.51
TRAF4-213ENST00000578917 CPOQ8IVL8 374 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 OR5AS1Q8N127 324 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 ZNF283Q8N7M2 679 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 BHLHE23Q8NDY6 225 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 OR6N2Q8NGY6 317 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 OR13G1Q8NGZ3 307 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 DNAJC9Q8WXX5 260 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 GTF3AQ92664 365 aaKnown RBP5.59□□□□□ -1.51
TRAF4-213ENST00000578917 SLAMF6Q96DU3 332 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 ZMYND19Q96E35 227 aaPredicted RBP5.59□□□□□ -1.51
TRAF4-213ENST00000578917 ELMOD3Q96FG2 381 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 ZNF799Q96GE5 643 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 INTS14Q96SY0 518 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 PRRG3Q9BZD7 231 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 SEMA6AQ9H2E6 1030 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 SP140LQ9H930 580 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 NTN4Q9HB63 628 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 BRD7Q9NPI1 651 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 ZNF275Q9NSD4 429 aaPredicted RBP5.59□□□□□ -1.51
TRAF4-213ENST00000578917 TMEM100Q9NV29 134 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 MRPL22Q9NWU5 206 aaKnown RBP5.59□□□□□ -1.51
TRAF4-213ENST00000578917 NKIRAS2Q9NYR9 191 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 ENOPH1Q9UHY7 261 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 PURGQ9UJV8 347 aaKnown RBP5.59□□□□□ -1.51
TRAF4-213ENST00000578917 KCNS2Q9ULS6 477 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 PCDHB10Q9UN67 800 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 ORC6Q9Y5N6 252 aa5.59□□□□□ -1.51
TRAF4-213ENST00000578917 GGT3PA6NGU5 568 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 ZSCAN5BA6NJL1 495 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 LRRC30A6NM36 301 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 VWC2LB2RUY7 222 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 J3QW42 95 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 TBX1O43435 398 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 LMX1BO60663 402 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 ICMTO60725 284 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 NCR1O76036 304 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 GLCEO94923 617 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 IFNA2P01563 188 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 ANXA2P07355 339 aaKnown RBP5.58□□□□□ -1.52
TRAF4-213ENST00000578917 H2BFMP0C1H6 154 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 SBK2P0C263 348 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 ACSM4P0C7M7 580 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 IGHV4-31P0DP07 118 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 ANPEPP15144 967 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 HNF1AP20823 631 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 ATP6V1E1P36543 226 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 SRP9P49458 86 aaKnown RBP5.58□□□□□ -1.52
TRAF4-213ENST00000578917 DAPP51397 102 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 MMP15P51511 669 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 ESRRGP62508 458 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 CDK5Q00535 292 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 CDK5R2Q13319 367 aa5.58□□□□□ -1.52
TRAF4-213ENST00000578917 RIN1Q13671 783 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms