RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 OMGP23515 440 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 RPS27P42677 84 aaKnown RBP7.47□□□□□ -1.21
GGA3-207ENST00000578896 LSM6P62312 80 aaKnown RBP7.47□□□□□ -1.21
GGA3-207ENST00000578896 PAX2Q02962 417 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 FOXL1Q12952 345 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 SLC9A3R2Q15599 337 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 TUSC1Q2TAM9 212 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 PRAMEF6Q5VXH4 476 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 GPR139Q6DWJ6 353 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 SLC27A4Q6P1M0 643 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 LEG1Q6P5S2 330 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 FBXW12Q6X9E4 464 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 BRD3OSQ6XYD6 125 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 DPY19L2P2Q6ZN68 376 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 CFAP77Q6ZQR2 320 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 PARP8Q8N3A8 854 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 BOLLQ8N9W6 283 aaKnown RBP7.47□□□□□ -1.21
GGA3-207ENST00000578896 OR13G1Q8NGZ3 307 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 C7orf34Q96L11 122 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 ZNF582Q96NG8 517 aaPredicted RBP7.47□□□□□ -1.21
GGA3-207ENST00000578896 GPX7Q96SL4 187 aaPredicted RBP7.47□□□□□ -1.21
GGA3-207ENST00000578896 HOPXQ9BPY8 73 aaPredicted RBP7.47□□□□□ -1.21
GGA3-207ENST00000578896 SLC30A2Q9BRI3 323 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 WACQ9BTA9 647 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 CDADC1Q9BWV3 514 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 SSBP3Q9BWW4 388 aaPredicted RBP7.47□□□□□ -1.21
GGA3-207ENST00000578896 UNKLQ9H9P5 680 aaKnown RBP7.47□□□□□ -1.21
GGA3-207ENST00000578896 EFCAB1Q9HAE3 211 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 RPRD1BQ9NQG5 326 aaKnown RBP7.47□□□□□ -1.21
GGA3-207ENST00000578896 UFSP2Q9NUQ7 469 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 TMEM100Q9NV29 134 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 MRGBPQ9NV56 204 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 AP3M1Q9Y2T2 418 aa7.47□□□□□ -1.21
GGA3-207ENST00000578896 POLR3KQ9Y2Y1 108 aaPredicted RBP7.47□□□□□ -1.21
GGA3-207ENST00000578896 PRKDCP78527 4128 aaKnown RBP7.47□□□□□ -1.21
GGA3-207ENST00000578896 IGHV2-70DA0A0C4DH43 119 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 A0A1W2PRQ8 180 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 SLC22A2O15244 555 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 TXNDC12O95881 172 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 LCATP04180 440 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 ACSM4P0C7M7 580 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 HIST1H1CP16403 213 aaKnown RBP7.46□□□□□ -1.22
GGA3-207ENST00000578896 RHCEP18577 417 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 TUBG1P23258 451 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 FPR3P25089 353 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 PYCR1P32322 319 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 MDH1P40925 334 aaKnown RBP7.46□□□□□ -1.22
GGA3-207ENST00000578896 SRP9P49458 86 aaKnown RBP7.46□□□□□ -1.22
GGA3-207ENST00000578896 RGS6P49758 472 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 RPS6KA3P51812 740 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 GNB2P62879 340 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 HIST1H3AP68431 136 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 SPIBQ01892 262 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 SRSF4Q08170 494 aaKnown RBP7.46□□□□□ -1.22
GGA3-207ENST00000578896 MAB21L1Q13394 359 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 DGCR6Q14129 220 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 GK2Q14410 553 aaPredicted RBP7.46□□□□□ -1.22
GGA3-207ENST00000578896 MPPED2Q15777 294 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 KCNMB1Q16558 191 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 SLC35F1Q5T1Q4 408 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 HIST2H3PS2Q5TEC6 136 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 RUSC1-AS1Q66K80 236 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 SMARCD3Q6STE5 483 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 LYPD4Q6UWN0 246 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 HIST2H3AQ71DI3 136 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 MUC20Q8N307 709 aaPredicted RBP7.46□□□□□ -1.22
GGA3-207ENST00000578896 SDR9C7Q8NEX9 313 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 GJC3Q8NFK1 279 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 OR5L1Q8NGL2 311 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 FANK1Q8TC84 345 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 ZNRF4Q8WWF5 429 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 RAB40AQ8WXH6 277 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 APOBEC3DQ96AK3 386 aaPredicted RBP7.46□□□□□ -1.22
GGA3-207ENST00000578896 SLCO4A1Q96BD0 722 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 NEIL1Q96FI4 390 aaPredicted RBP7.46□□□□□ -1.22
GGA3-207ENST00000578896 COG8Q96MW5 612 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 PITX2Q99697 317 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 COQ7Q99807 217 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 FUZQ9BT04 418 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 IFT27Q9BW83 186 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 NDEL1Q9GZM8 345 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 RASSF4Q9H2L5 321 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 OR52D1Q9H346 318 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 ANKRD19PQ9H560 264 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 TUBG2Q9NRH3 451 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 ADA2Q9NZK5 511 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 TMCC3Q9ULS5 477 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 LRCH1Q9Y2L9 728 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 N6AMT1Q9Y5N5 214 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 VWFP04275 2813 aa7.46□□□□□ -1.22
GGA3-207ENST00000578896 OR6C68A6NDL8 312 aa7.45□□□□□ -1.22
GGA3-207ENST00000578896 TVP23AA6NH52 213 aa7.45□□□□□ -1.22
GGA3-207ENST00000578896 IQCF6A8MYZ5 107 aa7.45□□□□□ -1.22
GGA3-207ENST00000578896 C22orf46C9J442 243 aa7.45□□□□□ -1.22
GGA3-207ENST00000578896 CCDC22O60826 627 aa7.45□□□□□ -1.22
GGA3-207ENST00000578896 FAM20BO75063 409 aa7.45□□□□□ -1.22
GGA3-207ENST00000578896 HLA-DQA2P01906 255 aa7.45□□□□□ -1.22
GGA3-207ENST00000578896 PSKH1P11801 424 aa7.45□□□□□ -1.22
GGA3-207ENST00000578896 MDKP21741 143 aaPredicted RBP7.45□□□□□ -1.22
GGA3-207ENST00000578896 CRABP1P29762 137 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms