RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 M0R129 80 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 M0R135 149 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 M0R233 179 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 PHYHO14832 338 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 CASQ2O14958 399 aaPredicted RBP9.9□□□□□ -0.82
ERBB2-208ENST00000578630 SELENOFO60613 162 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 IGHV3-13P01766 116 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 H2BFMP0C1H6 154 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 ACSM4P0C7M7 580 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 ALOX5APP20292 161 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 HTR1FP30939 366 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 NAA10P41227 235 aaPredicted RBP9.9□□□□□ -0.82
ERBB2-208ENST00000578630 SLC6A9P48067 706 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 PPOXP50336 477 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 MALLQ13021 153 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 GGTLC2Q14390 218 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 OCLNQ16625 522 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 NKPD1Q17RQ9 610 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 RSPO1Q2MKA7 263 aaPredicted RBP9.9□□□□□ -0.82
ERBB2-208ENST00000578630 KRTAP27-1Q3LI81 207 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 OGFRL1Q5TC84 451 aaPredicted RBP9.9□□□□□ -0.82
ERBB2-208ENST00000578630 BCDIN3DQ7Z5W3 292 aaKnown RBP9.9□□□□□ -0.82
ERBB2-208ENST00000578630 KRT77Q7Z794 578 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 LRP11Q86VZ4 500 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 DHRSXQ8N5I4 330 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 ZNF283Q8N7M2 679 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 KLF14Q8TD94 323 aaPredicted RBP9.9□□□□□ -0.82
ERBB2-208ENST00000578630 ST7LQ8TDW4 575 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 SNX33Q8WV41 574 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 RNF133Q8WVZ7 376 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 NEU4Q8WWR8 484 aaPredicted RBP9.9□□□□□ -0.82
ERBB2-208ENST00000578630 ASB17Q8WXJ9 295 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 UBE2FQ969M7 185 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 ZNF799Q96GE5 643 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 ZNF582Q96NG8 517 aaPredicted RBP9.9□□□□□ -0.82
ERBB2-208ENST00000578630 MBOAT4Q96T53 435 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 CNN2Q99439 309 aaKnown RBP9.9□□□□□ -0.82
ERBB2-208ENST00000578630 C1QTNF5Q9BXJ0 243 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 NIPAL2Q9H841 368 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 RNPEPL1Q9HAU8 725 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 CYSLTR2Q9NS75 346 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 CLN6Q9NWW5 311 aa9.9□□□□□ -0.82
ERBB2-208ENST00000578630 ANKRD17O75179 2603 aaKnown RBP9.9□□□□□ -0.82
ERBB2-208ENST00000578630 CCDC168Q8NDH2 2452 aa9.9□□□□□ -0.83
ERBB2-208ENST00000578630 PLSCR5A0PG75 271 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 E9PQ18 207 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 CLPTM1O96005 669 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 F12P00748 615 aaPredicted RBP9.89□□□□□ -0.83
ERBB2-208ENST00000578630 ADRA2AP08913 450 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 MRPL3P09001 348 aaKnown RBP9.89□□□□□ -0.83
ERBB2-208ENST00000578630 RAC2P15153 192 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 PEX2P28328 305 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 PRKXP51817 358 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 EFNA4P52798 201 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 ERVS71-1P61550 626 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 SPATA46Q5T0L3 261 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 DEGS2Q6QHC5 323 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 COLCA1Q6ZS62 124 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 RFPL4BQ6ZWI9 263 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 SPATC1Q76KD6 591 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 NAA40Q86UY6 237 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 OR10S1Q8NGN2 331 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 RHOXF1Q8NHV9 184 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 CYGBQ8WWM9 190 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 HAVCR1Q96D42 359 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 CMBLQ96DG6 245 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 MROQ9BYG7 248 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 VCX3BQ9H321 246 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 CGGBP1Q9UFW8 167 aaPredicted RBP9.89□□□□□ -0.83
ERBB2-208ENST00000578630 PCDHGB1Q9Y5G3 927 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 N6AMT1Q9Y5N5 214 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 RAI1Q7Z5J4 1906 aaPredicted RBP9.89□□□□□ -0.83
ERBB2-208ENST00000578630 LRBAP50851 2863 aa9.89□□□□□ -0.83
ERBB2-208ENST00000578630 ZNF670-ZNF695F2Z2N8 137 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 ENTPD6O75354 484 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 ZNF254O75437 659 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 SBK2P0C263 348 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 OR2T7P0C7T2 308 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 SELEP16581 610 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 OTX1P32242 354 aaPredicted RBP9.88□□□□□ -0.83
ERBB2-208ENST00000578630 ALDH3B1P43353 468 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 MTNR1AP48039 350 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 HCCSP53701 268 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 DSCR9P59020 149 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 PSG7Q13046 419 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 TESK1Q15569 626 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 MSMPQ1L6U9 139 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 ZMAT1Q5H9K5 638 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 Q5PR19 223 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 SLC35F2Q8IXU6 374 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 SETD9Q8NE22 299 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 OR51G2Q8NGK0 314 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 OR2T27Q8NH04 317 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 MYCBPQ99417 103 aaPredicted RBP9.88□□□□□ -0.83
ERBB2-208ENST00000578630 PTTG3PQ9NZH4 202 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 DNAJC27Q9NZQ0 273 aa9.88□□□□□ -0.83
ERBB2-208ENST00000578630 NKX1-2Q9UD57 310 aaPredicted RBP9.88□□□□□ -0.83
ERBB2-208ENST00000578630 PDZD2O15018 2839 aa9.87□□□□□ -0.83
ERBB2-208ENST00000578630 H0YAE9 185 aa9.87□□□□□ -0.83
ERBB2-208ENST00000578630 DLGAP1O14490 977 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms