RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 PPP3CBP16298 524 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 AGAP20933 346 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 CRYBB2P43320 205 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 HTR5AP47898 357 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 HIKESHIQ53FT3 197 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 ZNF774Q6NX45 483 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 ARL9Q6T311 187 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 ELMOD2Q8IZ81 293 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 IL17RDQ8NFM7 739 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 OR1J2Q8NGS2 313 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 HTRA1Q92743 480 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 ISOC1Q96CN7 298 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 ZNF799Q96GE5 643 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 RGCCQ9H4X1 137 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 G6PC2Q9NQR9 355 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 CRNNQ9UBG3 495 aaPredicted RBP13.32□□□□□ -0.28
SS18-206ENST00000577572 SH3BGRL2Q9UJC5 107 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 OR52A1Q9UKL2 312 aa13.32□□□□□ -0.28
SS18-206ENST00000577572 SIRT4Q9Y6E7 314 aaPredicted RBP13.32□□□□□ -0.28
SS18-206ENST00000577572 CACNA1BQ00975 2339 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 ZGRF1Q86YA3 2104 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 A0A0U1RQV5 110 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 TRIM64BA6NI03 449 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 EEF1E1-BLOC1S5C9J1V9 151 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 EEF1E1O43324 174 aaKnown RBP13.31□□□□□ -0.28
SS18-206ENST00000577572 ICMTO60725 284 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 SC5DO75845 299 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 RGS9O75916 674 aaPredicted RBP13.31□□□□□ -0.28
SS18-206ENST00000577572 ZFPL1O95159 310 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 IGKV3-15P01624 115 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 RAF1P04049 648 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 ZNF12P17014 697 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 GADD45AP24522 165 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 MAPK3P27361 379 aaPredicted RBP13.31□□□□□ -0.28
SS18-206ENST00000577572 PSMB10P40306 273 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 CX3CR1P49238 355 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 ASCL1P50553 236 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 NANOS3P60323 173 aaKnown RBP13.31□□□□□ -0.28
SS18-206ENST00000577572 SLC3A1Q07837 685 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 MRPL49Q13405 166 aaKnown RBP13.31□□□□□ -0.28
SS18-206ENST00000577572 CTF1Q16619 201 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 RSPO1Q2MKA7 263 aaPredicted RBP13.31□□□□□ -0.28
SS18-206ENST00000577572 C4orf17Q53FE4 359 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 WDR38Q5JTN6 314 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 BCL2L15Q5TBC7 163 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 SLC16A12Q6ZSM3 486 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 SPATC1Q76KD6 591 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 PRSS45Q7RTY3 260 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 C1orf174Q8IYL3 243 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 PRSS35Q8N3Z0 413 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 ZNF283Q8N7M2 679 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 ZNF676Q8N7Q3 588 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 WDR31Q8NA23 367 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 RELL2Q8NC24 303 aaPredicted RBP13.31□□□□□ -0.28
SS18-206ENST00000577572 LILRB4Q8NHJ6 448 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 FGFBP3Q8TAT2 258 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 ABHD4Q8TB40 342 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 GPR148Q8TDV2 347 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 HSD17B8Q92506 261 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 ZNF75AQ96N20 296 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 GRIP1Q9Y3R0 1128 aa13.31□□□□□ -0.28
SS18-206ENST00000577572 RP1L1Q8IWN7 2480 aaPredicted RBP13.3□□□□□ -0.28
SS18-206ENST00000577572 CCDC160A6NGH7 325 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 C16orf97H3BN30 126 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 ARL6IP5O75915 188 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 PNPP00491 289 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 ACSM4P0C7M7 580 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 ACHEP22303 614 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 TUBG1P23258 451 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 STOMP27105 288 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 APLNRP35414 380 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 ZNF121P58317 390 aaPredicted RBP13.3□□□□□ -0.28
SS18-206ENST00000577572 TLE1Q04724 770 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 UNQ6126/PRO20091Q6UXV3 157 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 COLCA1Q6ZS62 124 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 LUZP2Q86TE4 346 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 LIX1LQ8IVB5 337 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 ZFP41Q8N8Y5 198 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 CPEB3Q8NE35 698 aaKnown RBP13.3□□□□□ -0.28
SS18-206ENST00000577572 AKR7LQ8NHP1 331 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 MUCL1Q96DR8 90 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 PBOV1Q9GZY1 135 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 TUBG2Q9NRH3 451 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 ERRFI1Q9UJM3 462 aaPredicted RBP13.3□□□□□ -0.28
SS18-206ENST00000577572 HHLA2Q9UM44 414 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 FREM1Q5H8C1 2179 aa13.3□□□□□ -0.28
SS18-206ENST00000577572 COL6A6A6NMZ7 2263 aa13.29□□□□□ -0.28
SS18-206ENST00000577572 F5H5K5 113 aa13.29□□□□□ -0.28
SS18-206ENST00000577572 H3BMQ9 156 aa13.29□□□□□ -0.28
SS18-206ENST00000577572 IGLV1-44P01699 117 aa13.29□□□□□ -0.28
SS18-206ENST00000577572 PATE4P0C8F1 98 aa13.29□□□□□ -0.28
SS18-206ENST00000577572 ZNF14P17017 642 aaPredicted RBP13.29□□□□□ -0.28
SS18-206ENST00000577572 CCL1P22362 96 aa13.29□□□□□ -0.28
SS18-206ENST00000577572 CFL1P23528 166 aaKnown RBP13.29□□□□□ -0.28
SS18-206ENST00000577572 UGT2B10P36537 528 aa13.29□□□□□ -0.28
SS18-206ENST00000577572 KIR3DL2P43630 455 aa13.29□□□□□ -0.28
SS18-206ENST00000577572 PRKXP51817 358 aa13.29□□□□□ -0.28
SS18-206ENST00000577572 RPS25P62851 125 aaKnown RBP13.29□□□□□ -0.28
SS18-206ENST00000577572 TUBA1BP68363 451 aa13.29□□□□□ -0.28
SS18-206ENST00000577572 GALK2Q01415 458 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms