RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 DNAJC9Q8WXX5 260 aa11.76□□□□□ -0.53
NDE1-211ENST00000576502 CCL17Q92583 94 aa11.76□□□□□ -0.53
NDE1-211ENST00000576502 ZNF582Q96NG8 517 aaPredicted RBP11.76□□□□□ -0.53
NDE1-211ENST00000576502 FEVQ99581 238 aa11.76□□□□□ -0.53
NDE1-211ENST00000576502 RBM4Q9BWF3 364 aaKnown RBP11.76□□□□□ -0.53
NDE1-211ENST00000576502 MMADHCQ9H3L0 296 aaPredicted RBP11.76□□□□□ -0.53
NDE1-211ENST00000576502 NARFLQ9H6Q4 476 aa11.76□□□□□ -0.53
NDE1-211ENST00000576502 MSL2Q9HCI7 577 aa11.76□□□□□ -0.53
NDE1-211ENST00000576502 ARMC1Q9NVT9 282 aa11.76□□□□□ -0.53
NDE1-211ENST00000576502 VNN3Q9NY84 501 aa11.76□□□□□ -0.53
NDE1-211ENST00000576502 PTTG3PQ9NZH4 202 aa11.76□□□□□ -0.53
NDE1-211ENST00000576502 PDP1Q9P0J1 537 aaPredicted RBP11.76□□□□□ -0.53
NDE1-211ENST00000576502 DNAJB9Q9UBS3 223 aa11.76□□□□□ -0.53
NDE1-211ENST00000576502 NOP16Q9Y3C1 178 aaKnown RBP11.76□□□□□ -0.53
NDE1-211ENST00000576502 FKBP6O75344 327 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 DEAF1O75398 565 aaPredicted RBP11.75□□□□□ -0.53
NDE1-211ENST00000576502 LCATP04180 440 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 HMGN1P05114 100 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 DBHP09172 617 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 GGT2P36268 569 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 SLC15A1P46059 708 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 SLC6A9P48067 706 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 ENTPD1P49961 510 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 CBX1P83916 185 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 CRMP1Q14194 572 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 CR1LQ2VPA4 569 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 CFAP77Q6ZQR2 320 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 OR6K6Q8NGW6 343 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 GTF3AQ92664 365 aaKnown RBP11.75□□□□□ -0.53
NDE1-211ENST00000576502 SLC7A6OSQ96CW6 309 aaPredicted RBP11.75□□□□□ -0.53
NDE1-211ENST00000576502 SP140LQ9H930 580 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 CMC2Q9NRP2 79 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 MRPL22Q9NWU5 206 aaKnown RBP11.75□□□□□ -0.53
NDE1-211ENST00000576502 KIF17Q9P2E2 1029 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 IL19Q9UHD0 177 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 TMEFF2Q9UIK5 374 aaPredicted RBP11.75□□□□□ -0.53
NDE1-211ENST00000576502 POMPQ9Y244 141 aa11.75□□□□□ -0.53
NDE1-211ENST00000576502 TANC2Q9HCD6 1990 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 TRAV20A0A0B4J274 112 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 TCRBV3S1A0A5B6 114 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 ISPDA4D126 451 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 M0R135 149 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 APOC1P02654 83 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 MSMBP08118 114 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 SPARCP09486 303 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 ACSM4P0C7M7 580 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 SPI1P17947 270 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 POU1F1P28069 291 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 IL2RGP31785 369 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 THBS2P35442 1172 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 SRP14P37108 136 aaKnown RBP11.74□□□□□ -0.53
NDE1-211ENST00000576502 SRP9P49458 86 aaKnown RBP11.74□□□□□ -0.53
NDE1-211ENST00000576502 RAD23AP54725 363 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 MVKQ03426 396 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 BNIP1Q12981 228 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 DRAM2Q6UX65 266 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 ATG16L2Q8NAA4 619 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 OR8G5Q8NG78 346 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 OR9Q1Q8NGQ5 310 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 OR4Q3Q8NH05 313 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 TMEM186Q96B77 213 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 NRBF2Q96F24 287 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 ZNF799Q96GE5 643 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 PLEKHA8Q96JA3 519 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 DDOQ99489 341 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 GAL3ST1Q99999 423 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 NIPSNAP1Q9BPW8 284 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 COPS4Q9BT78 406 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 C1QTNF5Q9BXJ0 243 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 SLC22A4Q9H015 551 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 POFUT1Q9H488 388 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 OPA3Q9H6K4 179 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 ZNF665Q9H7R5 613 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 DDX28Q9NUL7 540 aaKnown RBP11.74□□□□□ -0.53
NDE1-211ENST00000576502 TREM2Q9NZC2 230 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 WIPI2Q9Y4P8 454 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 COMMD3-BMI1R4GMX3 469 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 DYSFO75923 2080 aa11.74□□□□□ -0.53
NDE1-211ENST00000576502 TVP23AA6NH52 213 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 IQCF6A8MYZ5 107 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 ZNF878C9JN71 531 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 GSC2O15499 205 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 OSMP13725 252 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 GRB2P62993 217 aaKnown RBP11.73□□□□□ -0.53
NDE1-211ENST00000576502 HLXQ14774 488 aaPredicted RBP11.73□□□□□ -0.53
NDE1-211ENST00000576502 KRTAP27-1Q3LI81 207 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 TEX30Q5JUR7 227 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 AVPI1Q5T686 147 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 OR2T2Q6IF00 324 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 ACSM5Q6NUN0 579 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 SHQ1Q6PI26 577 aaKnown RBP11.73□□□□□ -0.53
NDE1-211ENST00000576502 COLCA1Q6ZS62 124 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 PGAP1Q75T13 922 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 SHFQ7M4L6 423 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 MRPL21Q7Z2W9 205 aaKnown RBP11.73□□□□□ -0.53
NDE1-211ENST00000576502 DCXRQ7Z4W1 244 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 SPICQ8N5J4 248 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 OR51L1Q8NGJ5 315 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 ST7LQ8TDW4 575 aa11.73□□□□□ -0.53
NDE1-211ENST00000576502 SPRYD4Q8WW59 207 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms