RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 TAS2R46P59540 309 aa16.16■□□□□ 0.18
ATPAF1-214ENST00000576409 LPAL2Q16609 132 aa16.16■□□□□ 0.18
ATPAF1-214ENST00000576409 CLEC12BQ2HXU8 276 aa16.16■□□□□ 0.18
ATPAF1-214ENST00000576409 PLCXD3Q63HM9 321 aa16.16■□□□□ 0.18
ATPAF1-214ENST00000576409 SLC30A7Q8NEW0 376 aa16.16■□□□□ 0.18
ATPAF1-214ENST00000576409 WNT2BQ93097 391 aa16.16■□□□□ 0.18
ATPAF1-214ENST00000576409 SUCNR1Q9BXA5 334 aa16.16■□□□□ 0.18
ATPAF1-214ENST00000576409 TGIF2Q9GZN2 237 aa16.16■□□□□ 0.18
ATPAF1-214ENST00000576409 LDAHQ9H6V9 325 aa16.16■□□□□ 0.18
ATPAF1-214ENST00000576409 UNKLQ9H9P5 680 aaKnown RBP16.16■□□□□ 0.18
ATPAF1-214ENST00000576409 FAM86C1Q9NVL1 165 aa16.16■□□□□ 0.18
ATPAF1-214ENST00000576409 C1orf123Q9NWV4 160 aa16.16■□□□□ 0.18
ATPAF1-214ENST00000576409 SLC17A4Q9Y2C5 497 aa16.16■□□□□ 0.18
ATPAF1-214ENST00000576409 RFPL4AA6NLU0 287 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 RFPL4AL1F8VTS6 287 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 H7C1Q1 480 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 ZNF749O43361 778 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 LRP3O75074 770 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 GABRA1P14867 456 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 LIMS1P48059 325 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 FUT5Q11128 374 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 C11orf87Q6NUJ2 197 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 GALNT16Q8N428 558 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 CCDC71LQ8N9Z2 235 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 OR51A2Q8NGJ7 313 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 NAA11Q9BSU3 229 aaPredicted RBP16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 MRM2Q9UI43 246 aaKnown RBP16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 ARID2Q68CP9 1835 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 NRXN2Q9P2S2 1712 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 RAB19A4D1S5 217 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 F12P00748 615 aaPredicted RBP16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 MSX1P28360 303 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 FCGR2CP31995 323 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 HSF1Q00613 529 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 MALLQ13021 153 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 PDCD1Q15116 288 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 ZNF626Q68DY1 528 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 BHLHE23Q8NDY6 225 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 ATOH1Q92858 354 aaPredicted RBP16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 SSX3Q99909 188 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 ZNF230Q9UIE0 474 aaPredicted RBP16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 SF3B6Q9Y3B4 125 aaKnown RBP16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 ADAP1O75689 374 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 IL5P05113 134 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 GRINAQ7Z429 371 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 TMEM52Q8NDY8 209 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 C4orf45Q96LM5 186 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 NMNAT2Q9BZQ4 307 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 OPN4Q9UHM6 478 aa16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 ELF5Q9UKW6 265 aaPredicted RBP16.15■□□□□ 0.18
ATPAF1-214ENST00000576409 TRIM64BA6NI03 449 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 NKX2-2O95096 273 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 CMTM1Q8IZ96 169 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 SFT2D1Q8WV19 159 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 ZNF2Q9BSG1 426 aaPredicted RBP16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 LHX9Q9NQ69 397 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 CHRNA9Q9UGM1 479 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 GPR160Q9UJ42 338 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 LRP12Q9Y561 859 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 GLAP06280 429 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 CELA2BP08218 269 aaPredicted RBP16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 CHATP28329 748 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 CD96P40200 585 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 HTR5AP47898 357 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 C17orf67Q0P5P2 114 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 HAGHQ16775 308 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 NKAIN3Q8N8D7 197 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 OR52N5Q8NH56 324 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 AKR1E2Q96JD6 320 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 SLC19A3Q9BZV2 496 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 FRRS1LQ9P0K9 344 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 PTRH2Q9Y3E5 179 aaKnown RBP16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 DSPPQ9NZW4 1301 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 ZNF728P0DKX0 622 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 NANOS3P60323 173 aaKnown RBP16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 KIAA0141Q14154 515 aaPredicted RBP16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 NPSR1Q6W5P4 371 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 LYG2Q86SG7 212 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 NAA40Q86UY6 237 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 ETFBKMTQ8IXQ9 262 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 OTOSQ8NHW6 89 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 NINJ1Q92982 152 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 OR8B4Q96RC9 309 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 CHST11Q9NPF2 352 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 GPR173Q9NS66 373 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 WIF1Q9Y5W5 379 aa16.14■□□□□ 0.17
ATPAF1-214ENST00000576409 LRRC37AA6NMS7 1700 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 ANKRD20A5PA0PJZ0 165 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 ALOX12BO75342 701 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 CXCL2P19875 107 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 PRICKLE4Q2TBC4 344 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 CDONQ4KMG0 1287 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 CLEC9AQ6UXN8 241 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 EXOSC3Q9NQT5 275 aaKnown RBP16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 ACAD8Q9UKU7 415 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 B3GALT5Q9Y2C3 310 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 GREM1O60565 184 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 ZNF205O95201 554 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 PPICP45877 212 aa16.13■□□□□ 0.17
ATPAF1-214ENST00000576409 C4orf17Q53FE4 359 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms