RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 COQ7Q99807 217 aa9.55□□□□□ -0.88
RPAIN-214ENST00000574003 TSSK6Q9BXA6 273 aa9.55□□□□□ -0.88
RPAIN-214ENST00000574003 ARMC1Q9NVT9 282 aa9.55□□□□□ -0.88
RPAIN-214ENST00000574003 NDE1Q9NXR1 346 aa9.55□□□□□ -0.88
RPAIN-214ENST00000574003 METRNQ9UJH8 293 aa9.55□□□□□ -0.88
RPAIN-214ENST00000574003 FBN3Q75N90 2809 aa9.55□□□□□ -0.88
RPAIN-214ENST00000574003 TRAV20A0A0B4J274 112 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 F5H5P2 479 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 MLNRO43193 412 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 TCF21O43680 179 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 CYB5R3P00387 301 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-214ENST00000574003 PNPP00491 289 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 HLA-DPB1P04440 258 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 ACSM4P0C7M7 580 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 RAC2P15153 192 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 MAGEA2P43356 314 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 ZMAT1Q5H9K5 638 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 LCN8Q6JVE9 175 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 SHQ1Q6PI26 577 aaKnown RBP9.54□□□□□ -0.88
RPAIN-214ENST00000574003 DHFR2Q86XF0 187 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 C1orf174Q8IYL3 243 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 IQCF1Q8N6M8 205 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 ZNF283Q8N7M2 679 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-214ENST00000574003 ZNF511Q8NB15 262 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 SLC37A3Q8NCC5 494 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 CCDC197Q8NCU1 140 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 PROKR2Q8NFJ6 384 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 OR52L1Q8NGH7 329 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 OR2AJ1Q8NGZ0 328 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 APOBEC3DQ96AK3 386 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-214ENST00000574003 RAB39BQ96DA2 213 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 CDADC1Q9BWV3 514 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 HDHD2Q9H0R4 259 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 MMP26Q9NRE1 261 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 CGGBP1Q9UFW8 167 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-214ENST00000574003 CYB5R1Q9UHQ9 305 aa9.54□□□□□ -0.88
RPAIN-214ENST00000574003 DOCK11Q5JSL3 2073 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 IDH3BO43837 385 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 KRT36O76013 467 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 FAM107AO95990 144 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 LCATP04180 440 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 PCMT1P22061 227 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 TNFSF4P23510 183 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 PMELP40967 661 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 MMP16P51512 607 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 SLC3A1Q07837 685 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 TRAP1Q12931 704 aaKnown RBP9.53□□□□□ -0.88
RPAIN-214ENST00000574003 CRMP1Q14194 572 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 TRIM25Q14258 630 aaKnown RBP9.53□□□□□ -0.88
RPAIN-214ENST00000574003 SNAI3Q3KNW1 292 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 SPATS1Q496A3 300 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 DCAF12L2Q5VW00 463 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 OR2T5Q6IEZ7 315 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 FBXW12Q6X9E4 464 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 COLCA1Q6ZS62 124 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 RASSF6Q6ZTQ3 369 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 SPATC1Q76KD6 591 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 TMEM179BQ7Z7N9 219 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 MOGAT3Q86VF5 341 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 RFLNBQ8N5W9 214 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 C19orf18Q8NEA5 215 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 OR8G5Q8NG78 346 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 OR2T29Q8NH02 315 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 C22orf15Q8WYQ4 148 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 SLCO4A1Q96BD0 722 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 MEGF10Q96KG7 1140 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 DIRC2Q96SL1 478 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 ATF6BQ99941 703 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 NIPSNAP1Q9BPW8 284 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 THTPAQ9BU02 230 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 TRIM15Q9C019 465 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 MED20Q9H944 212 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 GCM1Q9NP62 436 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 TBC1D23Q9NUY8 699 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 TAS2R1Q9NYW7 299 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 IL20Q9NYY1 176 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 OPN4Q9UHM6 478 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 SAMHD1Q9Y3Z3 626 aaKnown RBP9.53□□□□□ -0.88
RPAIN-214ENST00000574003 N6AMT1Q9Y5N5 214 aa9.53□□□□□ -0.88
RPAIN-214ENST00000574003 IQCF6A8MYZ5 107 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 TRAPPC2LH3BP13 241 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 TMEM178BH3BS89 294 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 SPARCP09486 303 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 SLC2A1P11166 492 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 ANPEPP15144 967 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 ZNF823P16415 610 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 EPHA1P21709 976 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 CALB2P22676 271 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 RGS6P49758 472 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 PRKXP51817 358 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 MNAT1P51948 309 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 GK2Q14410 553 aaPredicted RBP9.52□□□□□ -0.89
RPAIN-214ENST00000574003 SLC36A3Q495N2 470 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 PRAMEF6Q5VXH4 476 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 LIPNQ5VXI9 398 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 PGM2L1Q6PCE3 622 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 PEG10Q86TG7 708 aaKnown RBP9.52□□□□□ -0.89
RPAIN-214ENST00000574003 HS3ST5Q8IZT8 346 aa9.52□□□□□ -0.89
RPAIN-214ENST00000574003 OR5L1Q8NGL2 311 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms