RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 TOR3AQ9H497 397 aa9.48□□□□□ -0.89
CHD3-216ENST00000573936 PNRC2Q9NPJ4 139 aaKnown RBP9.48□□□□□ -0.89
CHD3-216ENST00000573936 DDX28Q9NUL7 540 aaKnown RBP9.48□□□□□ -0.89
CHD3-216ENST00000573936 SMPD3Q9NY59 655 aaPredicted RBP9.48□□□□□ -0.89
CHD3-216ENST00000573936 DUSP13Q9UII6 198 aa9.48□□□□□ -0.89
CHD3-216ENST00000573936 F5H5K5 113 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 H0YJX3 145 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 APOC1P02654 83 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 MT-ND5P03915 603 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 HEXAP06865 529 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 GRB2P62993 217 aaKnown RBP9.47□□□□□ -0.89
CHD3-216ENST00000573936 TMED1Q13445 227 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 KRTAP27-1Q3LI81 207 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 IZUMO2Q6UXV1 221 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 SLC16A9Q7RTY1 509 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 DPY19L4Q7Z388 723 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 KRTAP1-3Q8IUG1 177 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 ZNF101Q8IZC7 436 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 ZNF555Q8NEP9 628 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 FAM81AQ8TBF8 368 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 SLC25A40Q8TBP6 338 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 THEM6Q8WUY1 208 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 RFKQ969G6 155 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 APOBEC3DQ96AK3 386 aaPredicted RBP9.47□□□□□ -0.89
CHD3-216ENST00000573936 SLAMF6Q96DU3 332 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 MARS2Q96GW9 593 aaKnown RBP9.47□□□□□ -0.89
CHD3-216ENST00000573936 MAP6Q96JE9 813 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 MNTQ99583 582 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 SYT3Q9BQG1 590 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 COPS4Q9BT78 406 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 C1QTNF5Q9BXJ0 243 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 RAB1BQ9H0U4 201 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 MS4A5Q9H3V2 200 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 SP140LQ9H930 580 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 DYNLRB1Q9NP97 96 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 CENPMQ9NSP4 180 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 HAO2Q9NYQ3 351 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 WARS2Q9UGM6 360 aaKnown RBP9.47□□□□□ -0.89
CHD3-216ENST00000573936 LAMP5Q9UJQ1 280 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 GMPPBQ9Y5P6 360 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 TMEM14AQ9Y6G1 99 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 ROS1P08922 2347 aa9.47□□□□□ -0.89
CHD3-216ENST00000573936 HEATR1Q9H583 2144 aaKnown RBP9.46□□□□□ -0.89
CHD3-216ENST00000573936 IGLV3-9A0A075B6K5 115 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 LOC100130705A0A1B0GUX0 176 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 A0A1W2PPW3 197 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 CCDC182A6NF36 153 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 SNTNA6NMZ2 147 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 E9PQ18 207 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 M0R135 149 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 M0R233 179 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 PHYHO14832 338 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 MPZL2O60487 215 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 SELENOFO60613 162 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 NGFP01138 241 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 IGHV3-13P01766 116 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 LYNP07948 512 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 DBHP09172 617 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 ACSM4P0C7M7 580 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 HTR1FP30939 366 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 LIPAP38571 399 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 RPS27P42677 84 aaKnown RBP9.46□□□□□ -0.9
CHD3-216ENST00000573936 EFNA4P52798 201 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 ERVS71-1P61550 626 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 POU4F2Q12837 409 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 GGTLC2Q14390 218 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 SLC25A30Q5SVS4 291 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 MEDAGQ5VYS4 303 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 DRAM2Q6UX65 266 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 COLCA1Q6ZS62 124 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 RFPL4BQ6ZWI9 263 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.46□□□□□ -0.9
CHD3-216ENST00000573936 OTOSQ8NHW6 89 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 KLF14Q8TD94 323 aaPredicted RBP9.46□□□□□ -0.9
CHD3-216ENST00000573936 ST7LQ8TDW4 575 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 SNX33Q8WV41 574 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 RNF133Q8WVZ7 376 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 NEU4Q8WWR8 484 aaPredicted RBP9.46□□□□□ -0.9
CHD3-216ENST00000573936 ASB17Q8WXJ9 295 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 SLC7A6Q92536 515 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 ZNF799Q96GE5 643 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 KCNJ15Q99712 375 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 MDFIQ99750 246 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 VRK1Q99986 396 aaPredicted RBP9.46□□□□□ -0.9
CHD3-216ENST00000573936 ABHD6Q9BV23 337 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 OR2J1Q9GZK6 312 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 CYSLTR2Q9NS75 346 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 FAM118AQ9NWS6 357 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 TAAR3PQ9P1P4 343 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 CGGBP1Q9UFW8 167 aaPredicted RBP9.46□□□□□ -0.9
CHD3-216ENST00000573936 FZR1Q9UM11 496 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 STARD10Q9Y365 291 aa9.46□□□□□ -0.9
CHD3-216ENST00000573936 ANK3Q12955 4377 aaKnown RBP9.46□□□□□ -0.9
CHD3-216ENST00000573936 CSPG4Q6UVK1 2322 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 M0R129 80 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 SLC16A6O15403 523 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 CLPTM1O96005 669 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 F12P00748 615 aaPredicted RBP9.45□□□□□ -0.9
CHD3-216ENST00000573936 LCATP04180 440 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 ADRA2AP08913 450 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms