RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 PHYHIPLQ96FC7 376 aa17.02■□□□□ 0.32
SCARF1-206ENST00000573852 GAREM1Q9H706 876 aa17.02■□□□□ 0.32
SCARF1-206ENST00000573852 CENPMQ9NSP4 180 aa17.02■□□□□ 0.32
SCARF1-206ENST00000573852 TLCD2A6NGC4 264 aa17.02■□□□□ 0.31
SCARF1-206ENST00000573852 OR2AT4A6NND4 320 aa17.02■□□□□ 0.31
SCARF1-206ENST00000573852 FTCDNL1E5RQL4 147 aa17.02■□□□□ 0.31
SCARF1-206ENST00000573852 EIF1AYO14602 144 aaKnown RBP17.02■□□□□ 0.31
SCARF1-206ENST00000573852 FADS1O60427 444 aa17.02■□□□□ 0.31
SCARF1-206ENST00000573852 STK17BO94768 372 aa17.02■□□□□ 0.31
SCARF1-206ENST00000573852 LAMA1P25391 3075 aa17.02■□□□□ 0.31
SCARF1-206ENST00000573852 TMEM244Q5VVB8 128 aa17.02■□□□□ 0.31
SCARF1-206ENST00000573852 NKAIN3Q8N8D7 197 aa17.02■□□□□ 0.31
SCARF1-206ENST00000573852 CASTOR1Q8WTX7 329 aa17.02■□□□□ 0.31
SCARF1-206ENST00000573852 MPTX1A8MV57 137 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 TO15178 435 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 ERCC1P07992 297 aaPredicted RBP17.01■□□□□ 0.31
SCARF1-206ENST00000573852 HRH1P35367 487 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 RAB12Q6IQ22 244 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 KCTD9Q7L273 389 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 CLRN3Q8NCR9 226 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 MARC2Q969Z3 335 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 ZNF416Q9BWM5 594 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 NKX6-2Q9C056 277 aaPredicted RBP17.01■□□□□ 0.31
SCARF1-206ENST00000573852 PTGES2Q9H7Z7 377 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 FN3KRPQ9HA64 309 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 A0A1W2PPC4 97 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 PCP4L1A6NKN8 68 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 F5H0A9 414 aaPredicted RBP17.01■□□□□ 0.31
SCARF1-206ENST00000573852 H3BMH7 237 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 PRKACAP17612 351 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 MPZP25189 248 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 BDKRB2P30411 391 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 PRKXP51817 358 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 NSDHLQ15738 373 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 UNQ6126/PRO20091Q6UXV3 157 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 ZDHHC22Q8N966 263 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 OR1S2Q8NGQ3 325 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 LMX1AQ8TE12 382 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 FOXRED1Q96CU9 486 aaPredicted RBP17.01■□□□□ 0.31
SCARF1-206ENST00000573852 PHB2Q99623 299 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 MBD2Q9UBB5 411 aa17.01■□□□□ 0.31
SCARF1-206ENST00000573852 LILRA5A6NI73 299 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 EEF1E1-BLOC1S5C9J1V9 151 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 GNB3P16520 340 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 VAMP1P23763 118 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 PNLIPRP2P54317 469 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 QRFPP83859 136 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 INPP5JQ15735 1006 aaPredicted RBP17■□□□□ 0.31
SCARF1-206ENST00000573852 PCK2Q16822 640 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 PDSS1Q5T2R2 415 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 ASB10Q8WXI3 467 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 PCDHB16Q9NRJ7 776 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 CYB5R1Q9UHQ9 305 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 PCDHB10Q9UN67 800 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 EFSO43281 561 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 AKR1C4P17516 323 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 GNALP38405 381 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 TDGQ13569 410 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 SHHQ15465 462 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 HIST2H2ABQ8IUE6 130 aaPredicted RBP17■□□□□ 0.31
SCARF1-206ENST00000573852 ZNF248Q8NDW4 579 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 THAP6Q8TBB0 222 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 MRPL38Q96DV4 380 aaKnown RBP17■□□□□ 0.31
SCARF1-206ENST00000573852 ADAT3Q96EY9 351 aaPredicted RBP17■□□□□ 0.31
SCARF1-206ENST00000573852 ARL5BQ96KC2 179 aa17■□□□□ 0.31
SCARF1-206ENST00000573852 ADAM10O14672 748 aa16.99■□□□□ 0.31
SCARF1-206ENST00000573852 OR2T1O43869 369 aa16.99■□□□□ 0.31
SCARF1-206ENST00000573852 H2BFMP0C1H6 154 aa16.99■□□□□ 0.31
SCARF1-206ENST00000573852 VSIG8P0DPA2 414 aa16.99■□□□□ 0.31
SCARF1-206ENST00000573852 RLN3Q8WXF3 142 aa16.99■□□□□ 0.31
SCARF1-206ENST00000573852 FOXQ1Q9C009 403 aa16.99■□□□□ 0.31
SCARF1-206ENST00000573852 KCNK7Q9Y2U2 307 aa16.99■□□□□ 0.31
SCARF1-206ENST00000573852 C2orf72A6NCS6 295 aa16.99■□□□□ 0.31
SCARF1-206ENST00000573852 INO80EQ8NBZ0 244 aaPredicted RBP16.99■□□□□ 0.31
SCARF1-206ENST00000573852 ZC3H10Q96K80 434 aaKnown RBP16.99■□□□□ 0.31
SCARF1-206ENST00000573852 KCNK17Q96T54 332 aa16.99■□□□□ 0.31
SCARF1-206ENST00000573852 PIGMQ9H3S5 423 aa16.99■□□□□ 0.31
SCARF1-206ENST00000573852 FAM206AQ9NX38 181 aa16.99■□□□□ 0.31
SCARF1-206ENST00000573852 MED29Q9NX70 200 aa16.99■□□□□ 0.31
SCARF1-206ENST00000573852 COL5A1P20908 1838 aaPredicted RBP16.98■□□□□ 0.31
SCARF1-206ENST00000573852 NPIPA5E9PKD4 350 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 NDUFA2O43678 99 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 SSX5O60225 188 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 TTRP02766 147 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 HSD11B1P28845 292 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 EIF1AXP47813 144 aaKnown RBP16.98■□□□□ 0.31
SCARF1-206ENST00000573852 PABPC1L2AQ5JQF8 200 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 Q6ZS52 159 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 SLC29A4Q7RTT9 530 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 RNF144BQ7Z419 303 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 RNF133Q8WVZ7 376 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 DAZLQ92904 295 aaKnown RBP16.98■□□□□ 0.31
SCARF1-206ENST00000573852 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.98■□□□□ 0.31
SCARF1-206ENST00000573852 SLC6A15Q9H2J7 730 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 UCK1Q9HA47 277 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 ASF1BQ9NVP2 202 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 NPIPA1Q9UND3 350 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 IGLV3-19P01714 112 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 RAB3AP20336 220 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 MMP16P51512 607 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms