RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 C22orf42Q6IC83 251 aa11.95□□□□□ -0.5
CCDC40-209ENST00000573474 UNQ9370/PRO34162Q6UXP9 181 aa11.95□□□□□ -0.5
CCDC40-209ENST00000573474 ZNF704Q6ZNC4 412 aaPredicted RBP11.95□□□□□ -0.5
CCDC40-209ENST00000573474 CEACAM19Q7Z692 300 aa11.95□□□□□ -0.5
CCDC40-209ENST00000573474 CXorf67Q86X51 503 aaPredicted RBP11.95□□□□□ -0.5
CCDC40-209ENST00000573474 AKR7LQ8NHP1 331 aa11.95□□□□□ -0.5
CCDC40-209ENST00000573474 PHYHIPQ92561 330 aa11.95□□□□□ -0.5
CCDC40-209ENST00000573474 RND1Q92730 232 aa11.95□□□□□ -0.5
CCDC40-209ENST00000573474 KCTD7Q96MP8 289 aa11.95□□□□□ -0.5
CCDC40-209ENST00000573474 DMRTA2Q96SC8 542 aa11.95□□□□□ -0.5
CCDC40-209ENST00000573474 PBOV1Q9GZY1 135 aa11.95□□□□□ -0.5
CCDC40-209ENST00000573474 RNF167Q9H6Y7 350 aa11.95□□□□□ -0.5
CCDC40-209ENST00000573474 B3GNT2Q9NY97 397 aa11.95□□□□□ -0.5
CCDC40-209ENST00000573474 Q9UFV3 132 aa11.95□□□□□ -0.5
CCDC40-209ENST00000573474 NUFIP1Q9UHK0 495 aaKnown RBP11.95□□□□□ -0.5
CCDC40-209ENST00000573474 MEMO1Q9Y316 297 aa11.95□□□□□ -0.5
CCDC40-209ENST00000573474 ARHGAP21Q5T5U3 1957 aa11.95□□□□□ -0.5
CCDC40-209ENST00000573474 SPENQ96T58 3664 aaKnown RBP11.95□□□□□ -0.5
CCDC40-209ENST00000573474 ARPC4-TTLL3A0A0A6YYG9 625 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 A0A1W2PPW3 197 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 F5H5K5 113 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 RAD51DO75771 328 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 SC5DO75845 299 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 COX5BP10606 129 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 TGFBR1P36897 503 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 SERPINB10P48595 397 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 ZNF121P58317 390 aaPredicted RBP11.94□□□□□ -0.5
CCDC40-209ENST00000573474 UBE2NP61088 152 aaKnown RBP11.94□□□□□ -0.5
CCDC40-209ENST00000573474 RPS11P62280 158 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCDC40-209ENST00000573474 TUBA1BP68363 451 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 PLP2Q04941 152 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 SFRP5Q5T4F7 317 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 TMEM244Q5VVB8 128 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 ZNF474Q6S9Z5 364 aaPredicted RBP11.94□□□□□ -0.5
CCDC40-209ENST00000573474 DRAM2Q6UX65 266 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 TUBA1AQ71U36 451 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 ELMOD2Q8IZ81 293 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 C17orf78Q8N4C9 275 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 NDNFQ8TB73 568 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 GPR148Q8TDV2 347 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 PPP1R14AQ96A00 147 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 DCLRE1CQ96SD1 692 aaKnown RBP11.94□□□□□ -0.5
CCDC40-209ENST00000573474 DCSTAMPQ9H295 470 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 SP140LQ9H930 580 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 BRD7Q9NPI1 651 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 SLC17A5Q9NRA2 495 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 PTTG2Q9NZH5 202 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 OSGIN2Q9Y236 505 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 CACNA1CQ13936 2221 aa11.94□□□□□ -0.5
CCDC40-209ENST00000573474 NCOA6Q14686 2063 aaPredicted RBP11.93□□□□□ -0.5
CCDC40-209ENST00000573474 TRBV5-5A0A0J9YX44 114 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 IQCMA0A1B0GVH7 501 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 ZNF503-AS2A6NEH8 195 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 ZNF879B4DU55 563 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 M0R135 149 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 DVL2O14641 736 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 ATXN7O15265 892 aaPredicted RBP11.93□□□□□ -0.5
CCDC40-209ENST00000573474 ISG15P05161 165 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 ANXA2P07355 339 aaKnown RBP11.93□□□□□ -0.5
CCDC40-209ENST00000573474 DBHP09172 617 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 UBCP0CG48 685 aaKnown RBP11.93□□□□□ -0.5
CCDC40-209ENST00000573474 BMP5P22003 454 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 ACHEP22303 614 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 INSL4Q14641 139 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 GSG1Q2KHT4 349 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 ODF4Q2M2E3 257 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 ZMAT1Q5H9K5 638 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 BHLHA15Q7RTS1 189 aaPredicted RBP11.93□□□□□ -0.5
CCDC40-209ENST00000573474 PRSS45Q7RTY3 260 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 MRGPRGQ86SM5 289 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 RDH10Q8IZV5 341 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 CPEB3Q8NE35 698 aaKnown RBP11.93□□□□□ -0.5
CCDC40-209ENST00000573474 OR13C5Q8NGS8 318 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 SLC7A6Q92536 515 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 RGP1Q92546 391 aaPredicted RBP11.93□□□□□ -0.5
CCDC40-209ENST00000573474 THRSPQ92748 146 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 ZNF799Q96GE5 643 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 DCUN1D5Q9BTE7 237 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 ATRXP46100 2492 aa11.93□□□□□ -0.5
CCDC40-209ENST00000573474 ZGRF1Q86YA3 2104 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 A8MXE2 369 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 ARL6IP5O75915 188 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 TTRP02766 147 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 ACSM4P0C7M7 580 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 SLC2A1P11166 492 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 ZNF182P17025 639 aaPredicted RBP11.92□□□□□ -0.5
CCDC40-209ENST00000573474 MAPK3P27361 379 aaPredicted RBP11.92□□□□□ -0.5
CCDC40-209ENST00000573474 PCSK6P29122 969 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 HOXC12P31275 282 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 SLC6A9P48067 706 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 TSC22D1Q15714 1073 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 Q499Y3 187 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 NCCRP1Q6ZVX7 275 aaPredicted RBP11.92□□□□□ -0.5
CCDC40-209ENST00000573474 FAM57BQ71RH2 274 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 LUZP2Q86TE4 346 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 MDP1Q86V88 176 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 OR8B12Q8NGG6 310 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 DYNC2LI1Q8TCX1 351 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 PGAM5Q96HS1 289 aa11.92□□□□□ -0.5
CCDC40-209ENST00000573474 OR14A2Q96R54 314 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms