RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 SLX4IPQ5VYV7 408 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 SLC27A4Q6P1M0 643 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 MEX3BQ6ZN04 569 aaKnown RBP6.2□□□□□ -1.42
CNOT1-222ENST00000570139 ZNF620Q6ZNG0 422 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 NKAIN4Q8IVV8 208 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 NRMQ8IXM6 262 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 CYP4Z2PQ8N1L4 340 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 ZNF786Q8N393 782 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 CADM2Q8N3J6 435 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 TMEM156Q8N614 296 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 OR2T33Q8NG76 320 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 OR8J1Q8NGP2 316 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 FAM81AQ8TBF8 368 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 GRHL3Q8TE85 626 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 PAQR8Q8TEZ7 354 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 LIPHQ8WWY8 451 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 BPIFA2Q96DR5 249 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 TSSK2Q96PF2 358 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 VCX3AQ9NNX9 186 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 CTPS2Q9NRF8 586 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 SCN3BQ9NY72 215 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 IL20Q9NYY1 176 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 UBAP1Q9NZ09 502 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 FLRT3Q9NZU0 649 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 TPRKBQ9Y3C4 175 aa6.2□□□□□ -1.42
CNOT1-222ENST00000570139 TMEM129A0AVI4 362 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 A8MVM7 634 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 EFCAB9A8MZ26 197 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 ZNHIT1O43257 154 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 ZNF208O43345 1280 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 OR2T1O43869 369 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 THY1P04216 161 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 GNAO1P09471 354 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 IFI30P13284 250 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 POU2F1P14859 743 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 ZNF17P17021 662 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 ELK4P28324 431 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 SSTR2P30874 369 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 SOX3P41225 446 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 GLIPR1P48060 266 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 HLCSP50747 726 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 GAS1P54826 345 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 PRPS1P60891 318 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 SNRPGP62308 76 aaKnown RBP6.19□□□□□ -1.42
CNOT1-222ENST00000570139 HOXC5Q00444 222 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 CDK5Q00535 292 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 MYBPC1Q00872 1141 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 RUNX1T1Q06455 604 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 CD47Q08722 323 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 RAPSNQ13702 412 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 MAD2L1BPQ15013 274 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-222ENST00000570139 QPRTQ15274 297 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 ODF4Q2M2E3 257 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 GLYR1Q49A26 553 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-222ENST00000570139 SLC25A53Q5H9E4 307 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 ACER2Q5QJU3 275 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 RIPPLY2Q5TAB7 128 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 SLC22A10Q63ZE4 541 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 C12orf73Q69YU5 71 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 SMARCD3Q6STE5 483 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 CBLN3Q6UW01 205 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 APOOLQ6UXV4 268 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 WDR88Q6ZMY6 472 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 MARCH3Q86UD3 253 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 OR10G3Q8NGC4 313 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 FANK1Q8TC84 345 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 GPR119Q8TDV5 335 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 ABTB1Q969K4 478 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-222ENST00000570139 SGTBQ96EQ0 304 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 NODALQ96S42 347 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 TXN2Q99757 166 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 ANGPTL4Q9BY76 406 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 FKRPQ9H9S5 495 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 SH2D2AQ9NP31 389 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 PLCXD1Q9NUJ7 323 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 NDUFA13Q9P0J0 144 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 EXTL2Q9UBQ6 330 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 ZNF229Q9UJW7 825 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 SLC6A5Q9Y345 797 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 ZNF337Q9Y3M9 751 aa6.19□□□□□ -1.42
CNOT1-222ENST00000570139 CHCHD2Q9Y6H1 151 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-222ENST00000570139 CPAMD8Q8IZJ3 1885 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 TRAV36DV7A0A075B6V5 113 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 SLC1A7O00341 560 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 IDH3BO43837 385 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 WDR1O75083 606 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 PTBP3O95758 552 aaKnown RBP6.18□□□□□ -1.42
CNOT1-222ENST00000570139 CLPTM1O96005 669 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 P04436 131 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 TFAP2AP05549 437 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 LIPFP07098 398 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 LIFP15018 202 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 MYOD1P15172 320 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 F8A1P23610 371 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 CRHBPP24387 322 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 CYB561P49447 251 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 PCYT1AP49585 367 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 CNN1P51911 297 aaKnown RBP6.18□□□□□ -1.42
CNOT1-222ENST00000570139 DSCR4P56555 118 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms