RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 C6orf120Q7Z4R8 191 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 TMED4Q7Z7H5 227 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 LYSMD2Q8IV50 215 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 VRK3Q8IV63 474 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 OR1M1Q8NGA1 313 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 RDH11Q8TC12 318 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 PTPMT1Q8WUK0 201 aaPredicted RBP5.95□□□□□ -1.46
SMG1-217ENST00000569764 SFT2D1Q8WV19 159 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 HRASLS5Q96KN8 279 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 NRTNQ99748 197 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 ASPNQ9BXN1 380 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 OCIAD1Q9NX40 245 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 B3GNT2Q9NY97 397 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.95□□□□□ -1.46
SMG1-217ENST00000569764 SSR3Q9UNL2 185 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 PROCRQ9UNN8 238 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 FAM240BA0A1B0GVZ2 78 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 MAGEB4O15481 346 aaPredicted RBP5.95□□□□□ -1.46
SMG1-217ENST00000569764 PAGE4O60829 102 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 GDF5P43026 501 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 CCNIQ14094 377 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 DEFB134Q4QY38 66 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 NCMAPQ5T1S8 102 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 SBSNQ6UWP8 590 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 LARP4Q71RC2 724 aaKnown RBP eCLIP5.95□□□□□ -1.46
SMG1-217ENST00000569764 SKA3Q8IX90 412 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 LILRA3Q8N6C8 439 aaPredicted RBP5.95□□□□□ -1.46
SMG1-217ENST00000569764 OR1J4Q8NGS1 313 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 UBE2FQ969M7 185 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 TIMD4Q96H15 378 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 FAM210BQ96KR6 192 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 PRAP1Q96NZ9 151 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 CCDC32Q9BV29 185 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 CDCP1Q9H5V8 836 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 SLC6A20Q9NP91 592 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 NLKQ9UBE8 527 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 CSDC2Q9Y534 153 aaKnown RBP5.95□□□□□ -1.46
SMG1-217ENST00000569764 CREBBPQ92793 2442 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 K7EN84 100 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 HAX1O00165 279 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 TAPBPO15533 448 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 PAX6P26367 422 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 SRP14P37108 136 aaKnown RBP5.95□□□□□ -1.46
SMG1-217ENST00000569764 HLCSP50747 726 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 GFERP55789 205 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 RIPPLY3P57055 190 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 VWC2Q2TAL6 325 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 DEFB110Q30KQ9 67 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 GXYLT1Q4G148 440 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 RASSF6Q6ZTQ3 369 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 RANBP3LQ86VV4 465 aaPredicted RBP5.95□□□□□ -1.46
SMG1-217ENST00000569764 NUBPLQ8TB37 319 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 MSI2Q96DH6 328 aaKnown RBP5.95□□□□□ -1.46
SMG1-217ENST00000569764 ZNF556Q9HAH1 456 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 PCYT1BQ9Y5K3 369 aaPredicted RBP5.95□□□□□ -1.46
SMG1-217ENST00000569764 SAGE2PA6NJ88 616 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 SERPINA5P05154 406 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 KIR2DL3P43628 341 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 TCL1AP56279 114 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 WNT3P56703 355 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 DEFA1P59665 94 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 DEFA3P59666 94 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 CDKL1Q00532 357 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 HNRNPA0Q13151 305 aaKnown RBP5.94□□□□□ -1.46
SMG1-217ENST00000569764 GLDNQ6ZMI3 551 aaPredicted RBP5.94□□□□□ -1.46
SMG1-217ENST00000569764 GPAT4Q86UL3 456 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 DEFB107AQ8IZN7 70 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 COX18Q8N8Q8 333 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 OR5L1Q8NGL2 311 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 OR52I2Q8NH67 350 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 OR2V1Q8NHB1 315 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 RNF133Q8WVZ7 376 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 HOXB13Q92826 284 aaPredicted RBP5.94□□□□□ -1.46
SMG1-217ENST00000569764 RCN3Q96D15 328 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 MUS81Q96NY9 551 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 TIMP4Q99727 224 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 SLC52A3Q9NQ40 469 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 CDC42EP3Q9UKI2 254 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 STUB1Q9UNE7 303 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 ABCA7Q8IZY2 2146 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 TRBV5-4A0A0C4DH59 114 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 CDRT15L2A8MXV6 281 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 RS1O15537 224 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 SIAH2O43255 324 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 LINC00032P0C843 101 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 OR1D4P47884 311 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 HTR6P50406 440 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 CLDN12P56749 244 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 CEACAM7Q14002 265 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 IDNKQ5T6J7 187 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 TMEM65Q6PI78 240 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 STHQ8IWL8 128 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 OR2AK2Q8NG84 335 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 SMPDL3BQ92485 455 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 RAX2Q96IS3 184 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 SPSB2Q99619 263 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 DYNLRB1Q9NP97 96 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 TAS2R16Q9NYV7 291 aa5.94□□□□□ -1.46
SMG1-217ENST00000569764 PLEKHB1Q9UF11 243 aaPredicted RBP5.94□□□□□ -1.46
SMG1-217ENST00000569764 SH2B3Q9UQQ2 575 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms