RNA–Protein interactions for RNA: ENST00000568444.1

KLHDC4-222, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-222ENST00000568444 APOC1P02654 83 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 MT-ND2P03891 347 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 ANXA2P07355 339 aaKnown RBP12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 TACSTD2P09758 323 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 ACSM4P0C7M7 580 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 FAM157BP0CG42 384 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 LIMS3P0CW19 117 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 LIMS4P0CW20 117 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 COL8A1P27658 744 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 OR12D2P58182 307 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 ZNF829Q3KNS6 432 aaPredicted RBP12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 TMPRSS11AQ6ZMR5 421 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 C4orf45Q96LM5 186 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 DCLRE1CQ96SD1 692 aaKnown RBP12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 DOK1Q99704 481 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 NIPAL2Q9H841 368 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 ACOXLQ9NUZ1 547 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 ERGIC3Q9Y282 383 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 CAB39Q9Y376 341 aaPredicted RBP12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 RNF115Q9Y4L5 304 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 SPEF1Q9Y4P9 236 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 SNX5Q9Y5X3 404 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 ATP23Q9Y6H3 246 aa12.35□□□□□ -0.43
KLHDC4-222ENST00000568444 A6NNC1 897 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 SULT1C4O75897 302 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 MT-ND5P03915 603 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 LCATP04180 440 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 SLC2A1P11166 492 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 ZNF35P13682 527 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 PSMB10P40306 273 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 WNT5AP41221 380 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 RGS6P49758 472 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 CDH15P55291 814 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 ZNF121P58317 390 aaPredicted RBP12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 PSMA6P60900 246 aaKnown RBP12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 HGFACQ04756 655 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 RSPO1Q2MKA7 263 aaPredicted RBP12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 KCTD21Q4G0X4 260 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 OR2G6Q5TZ20 316 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 LIPNQ5VXI9 398 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 DRAM2Q6UX65 266 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 PRSS48Q7RTY5 328 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 KCTD20Q7Z5Y7 419 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 NAA40Q86UY6 237 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 KBTBD8Q8NFY9 601 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 ABHD4Q8TB40 342 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 SPRYD4Q8WW59 207 aaPredicted RBP12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 HS3ST6Q96QI5 342 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 ZNF649Q9BS31 505 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 ISG20L2Q9H9L3 353 aaKnown RBP12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 COL12A1Q99715 3063 aa12.34□□□□□ -0.43
KLHDC4-222ENST00000568444 TMEM269A0A1B0GVZ9 245 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 TBX1O43435 398 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 SMPD2O60906 423 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 LCKP06239 509 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 OTX1P32242 354 aaPredicted RBP12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 GBX2P52951 348 aaPredicted RBP12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 MFGE8Q08431 387 aaPredicted RBP12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 SNTB2Q13425 540 aaKnown RBP12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 DAZAP2Q15038 168 aaPredicted RBP12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 KRTAP27-1Q3LI81 207 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 ZNF684Q5T5D7 378 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 VHLLQ6RSH7 139 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 UNQ6126/PRO20091Q6UXV3 157 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 RFPL4BQ6ZWI9 263 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 FAM57BQ71RH2 274 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 ZNF101Q8IZC7 436 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 SYS1Q8N2H4 156 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 OR1J1Q8NGS3 322 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 OR52N1Q8NH53 320 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 PGAM5Q96HS1 289 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 MND1Q9BWT6 205 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 CDCA4Q9BXL8 241 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 SP140LQ9H930 580 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 R4GMQ9 66 aa12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 USP9XQ93008 2570 aaPredicted RBP12.33□□□□□ -0.44
KLHDC4-222ENST00000568444 DOPEY1Q5JWR5 2465 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 TMEM129A0AVI4 362 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 LOC110117498-PIK3R3F6TDL0 507 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 GOSR1O95249 250 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 PLAUP00749 431 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 HTR1AP08908 422 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 LOXP28300 417 aaPredicted RBP12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 PCSK6P29122 969 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 DCTDP32321 178 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 RAD52P43351 418 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 UCP2P55851 309 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 WNT4P56705 351 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 GFOD2Q3B7J2 385 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 SNAI3Q3KNW1 292 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 SPATA46Q5T0L3 261 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 BCL2L15Q5TBC7 163 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 ZNF544Q6NX49 715 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 ZNF704Q6ZNC4 412 aaPredicted RBP12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 KLBQ86Z14 1044 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 SVOPQ8N4V2 548 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 GATAD2BQ8WXI9 593 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 APOBEC3DQ96AK3 386 aaPredicted RBP12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 PELI1Q96FA3 418 aa12.32□□□□□ -0.44
KLHDC4-222ENST00000568444 NR1H4Q96RI1 486 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms