RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 EIF2B1Q14232 305 aaKnown RBP18.05■□□□□ 0.48
SHCBP1-205ENST00000566016 ZIK1Q3SY52 487 aaPredicted RBP18.05■□□□□ 0.48
SHCBP1-205ENST00000566016 SLC16A9Q7RTY1 509 aa18.05■□□□□ 0.48
SHCBP1-205ENST00000566016 OR5L1Q8NGL2 311 aa18.05■□□□□ 0.48
SHCBP1-205ENST00000566016 FAM81AQ8TBF8 368 aa18.05■□□□□ 0.48
SHCBP1-205ENST00000566016 ZNF799Q96GE5 643 aa18.05■□□□□ 0.48
SHCBP1-205ENST00000566016 COPS4Q9BT78 406 aa18.05■□□□□ 0.48
SHCBP1-205ENST00000566016 H2AFY2Q9P0M6 372 aaPredicted RBP18.05■□□□□ 0.48
SHCBP1-205ENST00000566016 A0A1W2PPW3 197 aa18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 F5H5K5 113 aa18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 NDUFS7O75251 213 aa18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 CLPTM1O96005 669 aa18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 LYNP07948 512 aa18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 ERCC1P07992 297 aaPredicted RBP18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 SLC25A30Q5SVS4 291 aa18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 SPATA46Q5T0L3 261 aa18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 DRAM2Q6UX65 266 aa18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 TGIF2LYQ8IUE0 185 aa18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 WFDC11Q8NEX6 87 aa18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 SORCS2Q96PQ0 1159 aa18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 CNN2Q99439 309 aaKnown RBP18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 KCNJ15Q99712 375 aa18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 RAB1BQ9H0U4 201 aa18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 SMPD3Q9NY59 655 aaPredicted RBP18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 WARS2Q9UGM6 360 aaKnown RBP18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 STARD10Q9Y365 291 aa18.04■□□□□ 0.48
SHCBP1-205ENST00000566016 F12P00748 615 aaPredicted RBP18.03■□□□□ 0.48
SHCBP1-205ENST00000566016 ALOX5APP20292 161 aa18.03■□□□□ 0.48
SHCBP1-205ENST00000566016 PEX2P28328 305 aa18.03■□□□□ 0.48
SHCBP1-205ENST00000566016 NAA10P41227 235 aaPredicted RBP18.03■□□□□ 0.48
SHCBP1-205ENST00000566016 SNRPGP62308 76 aaKnown RBP18.03■□□□□ 0.48
SHCBP1-205ENST00000566016 TMED1Q13445 227 aa18.03■□□□□ 0.48
SHCBP1-205ENST00000566016 FBXW12Q6X9E4 464 aa18.03■□□□□ 0.48
SHCBP1-205ENST00000566016 DNM1P46Q6ZS02 220 aa18.03■□□□□ 0.48
SHCBP1-205ENST00000566016 BCDIN3DQ7Z5W3 292 aaKnown RBP18.03■□□□□ 0.48
SHCBP1-205ENST00000566016 RFKQ969G6 155 aa18.03■□□□□ 0.48
SHCBP1-205ENST00000566016 VRK1Q99986 396 aaPredicted RBP18.03■□□□□ 0.48
SHCBP1-205ENST00000566016 TMEM14AQ9Y6G1 99 aa18.03■□□□□ 0.48
SHCBP1-205ENST00000566016 TEP1Q99973 2627 aaKnown RBP18.03■□□□□ 0.48
SHCBP1-205ENST00000566016 SLC16A6O15403 523 aa18.02■□□□□ 0.48
SHCBP1-205ENST00000566016 MT-ND5P03915 603 aa18.02■□□□□ 0.48
SHCBP1-205ENST00000566016 ADRA2AP08913 450 aa18.02■□□□□ 0.48
SHCBP1-205ENST00000566016 HTR1FP30939 366 aa18.02■□□□□ 0.48
SHCBP1-205ENST00000566016 MPV17P39210 176 aa18.02■□□□□ 0.48
SHCBP1-205ENST00000566016 OPRL1P41146 370 aa18.02■□□□□ 0.48
SHCBP1-205ENST00000566016 POU4F2Q12837 409 aa18.02■□□□□ 0.48
SHCBP1-205ENST00000566016 NKPD1Q17RQ9 610 aa18.02■□□□□ 0.48
SHCBP1-205ENST00000566016 SNX33Q8WV41 574 aa18.02■□□□□ 0.48
SHCBP1-205ENST00000566016 NEU4Q8WWR8 484 aaPredicted RBP18.02■□□□□ 0.48
SHCBP1-205ENST00000566016 MNTQ99583 582 aa18.02■□□□□ 0.48
SHCBP1-205ENST00000566016 CENPMQ9NSP4 180 aa18.02■□□□□ 0.48
SHCBP1-205ENST00000566016 TAAR3PQ9P1P4 343 aa18.02■□□□□ 0.48
SHCBP1-205ENST00000566016 GMPPBQ9Y5P6 360 aa18.02■□□□□ 0.48
SHCBP1-205ENST00000566016 ZANQ9Y493 2812 aa18.02■□□□□ 0.47
SHCBP1-205ENST00000566016 DLGAP1O14490 977 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 APOC1P02654 83 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 RAC2P15153 192 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 KITLGP21583 273 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 LIPAP38571 399 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 ALDH3B1P43353 468 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 MAD2L1BPQ15013 274 aaPredicted RBP18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 TAF13Q15543 124 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 TMEM255AQ5JRV8 349 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 OGFRL1Q5TC84 451 aaPredicted RBP18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 ZNF582Q96NG8 517 aaPredicted RBP18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 AMELYQ99218 206 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 MYOZ1Q9NP98 299 aaPredicted RBP18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 CYSLTR2Q9NS75 346 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 FAM118AQ9NWS6 357 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 LAMP5Q9UJQ1 280 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 MTORP42345 2549 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 MPZL2O60487 215 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 CSF3P09919 207 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 SLC6A9P48067 706 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 MMP15P51511 669 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 PSG7Q13046 419 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 LRRC36Q1X8D7 754 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 ZMAT1Q5H9K5 638 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 MEDAGQ5VYS4 303 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 LPCAT4Q643R3 524 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 DEGS2Q6QHC5 323 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 HAVCR1Q96D42 359 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 POFUT1Q9H488 388 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 NIPAL2Q9H841 368 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 ADGRL4Q9HBW9 690 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 NKIRAS2Q9NYR9 191 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 KLHDC2Q9Y2U9 406 aa18.01■□□□□ 0.47
SHCBP1-205ENST00000566016 LOC100130705A0A1B0GUX0 176 aa18■□□□□ 0.47
SHCBP1-205ENST00000566016 C17orf100A8MU93 164 aa18■□□□□ 0.47
SHCBP1-205ENST00000566016 LCATP04180 440 aa18■□□□□ 0.47
SHCBP1-205ENST00000566016 HSD11B1P28845 292 aa18■□□□□ 0.47
SHCBP1-205ENST00000566016 DSCR9P59020 149 aa18■□□□□ 0.47
SHCBP1-205ENST00000566016 OCLNQ16625 522 aa18■□□□□ 0.47
SHCBP1-205ENST00000566016 CLEC12BQ2HXU8 276 aa18■□□□□ 0.47
SHCBP1-205ENST00000566016 PCGF3Q3KNV8 242 aa18■□□□□ 0.47
SHCBP1-205ENST00000566016 KCTD18Q6PI47 426 aaPredicted RBP18■□□□□ 0.47
SHCBP1-205ENST00000566016 THEM6Q8WUY1 208 aa18■□□□□ 0.47
SHCBP1-205ENST00000566016 ASB17Q8WXJ9 295 aa18■□□□□ 0.47
SHCBP1-205ENST00000566016 Q96MF0 132 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms